Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 125 6e-24
seq210 91.5 1e-13
seq10174 86.0 6e-12
>seq2251
Length=6394
Score = 125 bits (138), Expect = 6e-24
Identities = 169/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
|||||||| | || ||| || | || | || ||||||||||| | ||| || |||
Sbjct 1231 TCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCG-- 1174
Query 94840 CATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
| || ||| | |||||||| ||| || ||| ||||||| | || |||||| |||||
Sbjct 1173 GAGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGT 1114
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TC 94956
|| || || || ||||| | |||||| || |||||| | | || ||| || || ||
Sbjct 1113 GGTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTC-GCTAGGCTC 1055
Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||| ||||||||||| |||||||| ||||| ||||| || |||||
Sbjct 1054 AACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004
>seq210
Length=64943
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || |||| ||| |||| |||||| || | || || |||||||| | ||| |
Sbjct 42406 TTTGCATGCCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGT 42347
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| || || |||| ||||||| |||||| || ||||||| | | ||| || |
Sbjct 42346 AGTCCGACAGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGT 42287
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
| || ||||| || || ||||| | ||| || ||||| || | | | |||
Sbjct 42286 CCGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCG 42227
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || |||||||||||||| || ||||| |||||
Sbjct 42226 GCTCCACCTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
||| | |||||| || | || ||||||||||| | || || ||| || ||||
Sbjct 39925 TCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACC 39866
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||| ||| || ||| | |||||||| | |||||||| || || || || || ||
Sbjct 39865 ATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTT 39806
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||| || ||||| || | | | ||| | | || || || | || ||
Sbjct 39805 GTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAAT 39746
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || ||||| || || |||||||| || |||||||
Sbjct 39745 TGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCATGC 39708
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
||| | |||||| || | || ||||||||||| | || || ||| || ||||
Sbjct 30839 TCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACC 30898
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||| ||| || ||| | |||||||| | |||||||| || || || || || ||
Sbjct 30899 ATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTT 30958
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||| || ||||| || | | | ||| | | || || || | || ||
Sbjct 30959 GTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAAT 31018
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| || || || || || ||||||||||| ||||||
Sbjct 31019 AGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCATG 31055
>seq10174
Length=1708
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945
||||| || ||||| ||||| || ||||| | |||||||||||| || | | || |
Sbjct 1146 TGCTGGTCCGGAGGGATACCCTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAG 1205
Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005
|||| | || || |||| |||||||| || || || |||||||| ||||| ||||||
Sbjct 1206 TCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGC 1265
Query 95006 AT 95007
||
Sbjct 1266 AT 1267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448122580868760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |