Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 96.9 4e-15
>seq4589
Length=3505
Score = 96.9 bits (106), Expect = 4e-15
Identities = 191/281 (68%), Gaps = 4/281 (1%)
Strand=Plus/Plus
Query 21769 ATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC 21828
||||||||||||||| || || || | || | || | ||| |||||||| | |||||
Sbjct 2675 ATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTC 2734
Query 21829 TGAACATTGAACCTCGGAATAAAATCGTTGA--GCCAAGTTTTCATTTACTATTCCATCA 21886
| | |||||| ||| | |||| || | | || ||||| || || || ||||||
Sbjct 2735 AGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCCATCA 2792
Query 21887 CTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTT 21946
|| || ||||| || |||| | || ||||| | |||||| ||| | | |||
Sbjct 2793 CTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAGATTT 2852
Query 21947 TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATA 22006
| |||||| | ||| || | |||||| || || ||| |||||||| ||| | |
Sbjct 2853 TCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACA 2912
Query 22007 GCCTTTTTATACATAATCCAGATATCATTATATATTATTGG 22047
|| || ||||| | ||| || |||| |||| ||||||
Sbjct 2913 GCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGG 2953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531700732162840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |