Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4589 96.9 4e-15 >seq4589 Length=3505 Score = 96.9 bits (106), Expect = 4e-15 Identities = 191/281 (68%), Gaps = 4/281 (1%) Strand=Plus/Plus Query 21769 ATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC 21828 ||||||||||||||| || || || | || | || | ||| |||||||| | ||||| Sbjct 2675 ATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTC 2734 Query 21829 TGAACATTGAACCTCGGAATAAAATCGTTGA--GCCAAGTTTTCATTTACTATTCCATCA 21886 | | |||||| ||| | |||| || | | || ||||| || || || |||||| Sbjct 2735 AGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCCATCA 2792 Query 21887 CTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTT 21946 || || ||||| || |||| | || ||||| | |||||| ||| | | ||| Sbjct 2793 CTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAGATTT 2852 Query 21947 TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATA 22006 | |||||| | ||| || | |||||| || || ||| |||||||| ||| | | Sbjct 2853 TCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACA 2912 Query 22007 GCCTTTTTATACATAATCCAGATATCATTATATATTATTGG 22047 || || ||||| | ||| || |||| |||| |||||| Sbjct 2913 GCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGG 2953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531700732162840