Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 224 1e-53
seq4951 107 2e-18
>seq4589
Length=3505
Score = 224 bits (248), Expect = 1e-53
Identities = 501/747 (67%), Gaps = 9/747 (1%)
Strand=Plus/Plus
Query 33174 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 33233
||||||||| || ||||| | || || | || | || || ||||| ||| |||
Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311
Query 33234 TACCGCATCTGTTATAATAGATCTA-ACGGTTTCTTCACTCGGTGGATGCAATAAATGTT 33292
|| || || || ||||| | || || ||||| | | ||| || | | || |
Sbjct 2312 GACGGCCTCCGTCATAAT-GTCATACACTCTTTCTGCTGTAGGTTTATTGACAATGTGCT 2370
Query 33293 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 33352
| || || | ||| || || ||| ||| || || || || | ||| || || |||||
Sbjct 2371 TGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTAC 2430
Query 33353 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33412
|| || || || ||||| || |||||||| || |||||||| || ||||| || || |
Sbjct 2431 TGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAAC 2490
Query 33413 CAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC 33472
| || ||||| | || || | ||||| || || | | | ||| | || || |
Sbjct 2491 CGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCC 2550
Query 33473 TGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33529
| | || |||||||| | |||||||| |||||||| || || |||| |||||
Sbjct 2551 TCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTT 2610
Query 33530 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33589
||||| ||||| | | | | || || || ||||| |||||||||| ||
Sbjct 2611 GAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAA 2670
Query 33590 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33649
|| ||||||||| ||||||||||| |||| ||||| || | ||| || ||||| | ||
Sbjct 2671 GAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAG 2730
Query 33650 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTC--CGCCAAATTTTCATTCACTATTCC 33707
|||| | || || ||||| ||||||| ||| | |||||||| || || || ||
Sbjct 2731 CCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCC 2788
Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG 33767
||||| |||||||| || |||| |||| ||||| | | ||| | | ||
Sbjct 2789 ATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAG 2848
Query 33768 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827
|| | |||||| | | ||| || | || ||| || || || || |||||||| || ||
Sbjct 2849 ATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGC 2908
Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
| || || ||||| | | ||| ||||||| |||||| ||||| | | ||||||||
Sbjct 2909 GACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATCT 2968
Query 33888 ATTTGGATTTGGTGCAAGGATGGGTTC 33914
||||| || |||| | |||||
Sbjct 2969 TCGAGGATTGGGAACAAGTAAAGGTTC 2995
>seq4951
Length=3275
Score = 107 bits (118), Expect = 2e-18
Identities = 176/254 (69%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554
|| || || || || |||| ||||| | || || |||| | |||||| || || |||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614
|| || || ||||| |||| | | | ||| ||||||||||| || | | ||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674
|| || ||||| | || || || || || | ||||| ||| |||| | ||||||||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734
|||||||| || | || | || ||||| |||| | ||| ||||| ||||||
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427
Query 63735 TGCTGAGGTCTTTC 63748
| ||||||||| ||
Sbjct 2428 TACTGAGGTCTCTC 2441
Score = 100 bits (110), Expect = 4e-16
Identities = 304/468 (65%), Gaps = 4/468 (1%)
Strand=Plus/Plus
Query 63136 GTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 63195
||||||| || || ||||| || | | ||||| ||||||| ||| ||| || |
Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752
Query 63196 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 63255
||| || || | || | ||||| || ||||| || |||||||| || | |
Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812
Query 63256 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63315
| |||||||| | | | ||||| || || ||||| | || | || ||
Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872
Query 63316 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63375
| ||| | |||||| || || | ||| | || | | ||||| |||||||| || |
Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932
Query 63376 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63435
| || |||| || | ||| ||| | || | |||| || ||| || | || ||| || |
Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992
Query 63436 ATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63493
| |||||||| |||| ||| | | || | |||||| | || |||| |
Sbjct 1993 ACTCCCCATTGGTGCCGGCGATGAACGTGCCCTTACTCCGAATACAATGAACATTGA--G 2050
Query 63494 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACC 63553
||| || || || || |||| ||||| | || || |||| | |||||| || || ||
Sbjct 2051 ACCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCC 2110
Query 63554 CTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601
||| || || ||||| |||| | | | ||| ||||||||||| ||
Sbjct 2111 CTCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158
Score = 82.4 bits (90), Expect = 1e-10
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 62946 ATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTG 63005
||||| ||||||||||| ||||| ||||| |||| || ||| ||||| ||| |
Sbjct 1433 ATCTCGGTGCAAAGATTTGAGCACTTTATAGTCCCTAGATGTTGATGATTGGACTTCCGG 1492
Query 63006 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63053
||||| | |||||||||||| || || ||| | || ||||| ||||||
Sbjct 1493 TTACAAGAATCCTTATAAAGCATAAAGGGATTGCCTGTTTCGATCTGA 1540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622712886197560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |