Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4589 224 1e-53 seq4951 107 2e-18 >seq4589 Length=3505 Score = 224 bits (248), Expect = 1e-53 Identities = 501/747 (67%), Gaps = 9/747 (1%) Strand=Plus/Plus Query 33174 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 33233 ||||||||| || ||||| | || || | || | || || ||||| ||| ||| Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311 Query 33234 TACCGCATCTGTTATAATAGATCTA-ACGGTTTCTTCACTCGGTGGATGCAATAAATGTT 33292 || || || || ||||| | || || ||||| | | ||| || | | || | Sbjct 2312 GACGGCCTCCGTCATAAT-GTCATACACTCTTTCTGCTGTAGGTTTATTGACAATGTGCT 2370 Query 33293 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 33352 | || || | ||| || || ||| ||| || || || || | ||| || || ||||| Sbjct 2371 TGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTAC 2430 Query 33353 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33412 || || || || ||||| || |||||||| || |||||||| || ||||| || || | Sbjct 2431 TGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAAC 2490 Query 33413 CAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC 33472 | || ||||| | || || | ||||| || || | | | ||| | || || | Sbjct 2491 CGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCC 2550 Query 33473 TGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33529 | | || |||||||| | |||||||| |||||||| || || |||| ||||| Sbjct 2551 TCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTT 2610 Query 33530 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33589 ||||| ||||| | | | | || || || ||||| |||||||||| || Sbjct 2611 GAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAA 2670 Query 33590 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33649 || ||||||||| ||||||||||| |||| ||||| || | ||| || ||||| | || Sbjct 2671 GAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAG 2730 Query 33650 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTC--CGCCAAATTTTCATTCACTATTCC 33707 |||| | || || ||||| ||||||| ||| | |||||||| || || || || Sbjct 2731 CCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCC 2788 Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG 33767 ||||| |||||||| || |||| |||| ||||| | | ||| | | || Sbjct 2789 ATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAG 2848 Query 33768 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827 || | |||||| | | ||| || | || ||| || || || || |||||||| || || Sbjct 2849 ATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGC 2908 Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 | || || ||||| | | ||| ||||||| |||||| ||||| | | |||||||| Sbjct 2909 GACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATCT 2968 Query 33888 ATTTGGATTTGGTGCAAGGATGGGTTC 33914 ||||| || |||| | ||||| Sbjct 2969 TCGAGGATTGGGAACAAGTAAAGGTTC 2995 >seq4951 Length=3275 Score = 107 bits (118), Expect = 2e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || || || || || |||| ||||| | || || |||| | |||||| || || ||| Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || || || ||||| |||| | | | ||| ||||||||||| || | | || Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || || ||||| | || || || || || | ||||| ||| |||| | |||||||||| Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 |||||||| || | || | || ||||| |||| | ||| ||||| |||||| Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427 Query 63735 TGCTGAGGTCTTTC 63748 | ||||||||| || Sbjct 2428 TACTGAGGTCTCTC 2441 Score = 100 bits (110), Expect = 4e-16 Identities = 304/468 (65%), Gaps = 4/468 (1%) Strand=Plus/Plus Query 63136 GTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 63195 ||||||| || || ||||| || | | ||||| ||||||| ||| ||| || | Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752 Query 63196 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 63255 ||| || || | || | ||||| || ||||| || |||||||| || | | Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812 Query 63256 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63315 | |||||||| | | | ||||| || || ||||| | || | || || Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872 Query 63316 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63375 | ||| | |||||| || || | ||| | || | | ||||| |||||||| || | Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932 Query 63376 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63435 | || |||| || | ||| ||| | || | |||| || ||| || | || ||| || | Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992 Query 63436 ATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63493 | |||||||| |||| ||| | | || | |||||| | || |||| | Sbjct 1993 ACTCCCCATTGGTGCCGGCGATGAACGTGCCCTTACTCCGAATACAATGAACATTGA--G 2050 Query 63494 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACC 63553 ||| || || || || |||| ||||| | || || |||| | |||||| || || || Sbjct 2051 ACCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCC 2110 Query 63554 CTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601 ||| || || ||||| |||| | | | ||| ||||||||||| || Sbjct 2111 CTCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158 Score = 82.4 bits (90), Expect = 1e-10 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 62946 ATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTG 63005 ||||| ||||||||||| ||||| ||||| |||| || ||| ||||| ||| | Sbjct 1433 ATCTCGGTGCAAAGATTTGAGCACTTTATAGTCCCTAGATGTTGATGATTGGACTTCCGG 1492 Query 63006 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63053 ||||| | |||||||||||| || || ||| | || ||||| |||||| Sbjct 1493 TTACAAGAATCCTTATAAAGCATAAAGGGATTGCCTGTTTCGATCTGA 1540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622712886197560