Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2251 105 6e-18 >seq2251 Length=6394 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | ||||| ||||| | ||||| ||| | || || | || || ||| | Sbjct 1001 AAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCT 1060 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | |||| | || ||| | |||||| || ||| ||||| || |||||||| || || Sbjct 1061 AGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGAC 1120 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || || |||| || | | ||||||||| | || |||| ||| || ||| || Sbjct 1121 CAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTAC 1180 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||||||||| ||||| || | ||| | || || ||| | |||||||| Sbjct 1181 AACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGGA 1231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429778327824105