Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq2251 116 3e-21 seq10174 82.4 6e-11 >seq2251 Length=6394 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||||||||| ||||| || || || |||||||| || | || ||| | Sbjct 1001 AAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCT 1060 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 |||||| || ||| | || ||| |||||| || || || ||| | || || Sbjct 1061 AGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGAC 1120 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||| ||||||| | ||| ||||| || || || |||| ||| | |||| || Sbjct 1121 CAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTAC 1180 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| || || || | ||| | || |||||| | |||||||||| Sbjct 1181 AACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGGAA 1232 >seq10174 Length=1708 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| ||||| || || ||||| ||| | || || | Sbjct 1267 ATGCAGATTTTTGTCAAAACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAACCTTCT 1208 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| || ||| | || || ||||||| || || || || |||| || ||| Sbjct 1207 GACTCTATTGAGAATGTGAAGGCAAAAATTCAAGACAAGGAGGGTATCCCTCCGGACCAG 1148 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||||| ||| ||||| ||||||||||||| || || |||| || || Sbjct 1147 CAGCGTCTTATTTTTGCTGGCAAGCAATTAGAAGATGGGCGGTCCTTGTCCGACTACAAT 1088 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||| || | ||| | ||| Sbjct 1087 ATTCAGAAGGAGTCAACGCTTCATCTTGTG 1058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425188011866920