Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2251 131 1e-25 seq10174 116 3e-21 seq210 107 2e-18 seq30086 91.5 1e-13 seq25 84.2 2e-11 >seq2251 Length=6394 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||||||| |||| || | ||| ||||| || |||||||| ||||||||||||| Sbjct 1230 CCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAG 1171 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||||||| || ||||| ||| | ||||| || || ||||| || Sbjct 1170 AGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGT 1111 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||||| | || || | | | || ||||| ||||| Sbjct 1110 ATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACC 1051 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||||||||||| || || || ||||| |||||||| |||||||| Sbjct 1050 TCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq10174 Length=1708 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| ||||| |||||||| || || |||||||||| || || | || Sbjct 1056 AGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCT 1115 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || ||||| ||||| ||| ||||||| ||||| |||||| ||| | ||||| ||||| Sbjct 1116 TCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCT 1175 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| |||||| | | | || ||| || || || | ||||||||| Sbjct 1176 TGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTC 1235 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || |||||||||||||||||||| Sbjct 1236 TTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 >seq210 Length=64943 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| | | ||| |||| ||| || || ||||||||||| ||||||||||| | | Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||||||||| ||||| || ||| | || || || ||||||||| || Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | | |||||| | | | | || | |||||| Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||| || || || || || || |||||||| || || ||||| Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || |||||||||||||| |||||||||| || || | || Sbjct 39693 AGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCT 39634 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || |||||| | || | ||||| |||||| || | |||||| ||||| Sbjct 39633 TCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 39574 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 |||| | |||||| | | | | ||| | |||||| |||| ||| || || Sbjct 39573 TGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTC 39514 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| || ||||| || ||||| Sbjct 39513 TTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||||||||| |||||||| | || ||| |||||| Sbjct 30615 AGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT----GCGTCC 30670 Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839 ||||| || || || || | || | |||||||||||| || | |||||| || Sbjct 30671 ATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTT 30730 Query 16840 GTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899 ||| || | | |||||| | | | | ||| | |||||| |||| ||| || Sbjct 30731 GTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAAT 30790 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || |||| ||| || ||||| || ||||| Sbjct 30791 CGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||||||||| |||||||| | || ||| |||||| Sbjct 40149 AGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT----GCGTCC 40094 Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839 ||||| || || || || | || | |||||||||||| || | |||||| || Sbjct 40093 ATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTT 40034 Query 16840 GTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899 ||| || | | |||||| | | | | ||| | |||||| |||| ||| || Sbjct 40033 GTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAAT 39974 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || |||| ||| || ||||| || ||||| Sbjct 39973 CGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| || ||||||||||| ||||||||||| | || || | || Sbjct 30387 AGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCT 30446 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || |||||| | || | ||||| |||||| || | |||||| ||||| Sbjct 30447 TCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 30506 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | |||||| | | | | ||| | |||||| |||| ||| || || Sbjct 30507 TGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTC 30566 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || ||||| || ||||| Sbjct 30567 TTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || ||||| ||||| ||||||||||| | || || | || Sbjct 39465 AGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCT 39406 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| | || | |||||||||||| || | |||||| ||||| Sbjct 39405 TCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCT 39346 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||| | |||||| |||| || || || Sbjct 39345 TGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTC 39286 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||| |||||| ||||| || ||||| Sbjct 39285 TTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 >seq30086 Length=500 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||||||||| |||||||| | || ||| |||||| Sbjct 145 AGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT----GCGTCC 200 Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839 ||||| || || || || | || | |||||||||||| || | |||||| || Sbjct 201 ATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTT 260 Query 16840 GTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899 ||| || | | |||||| | | | | ||| | |||||| |||| ||| || Sbjct 261 GTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAAT 320 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || |||| ||| || ||||| || ||||| Sbjct 321 CGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 >seq25 Length=187393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/137 (75%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 19397 GCACGGTTTTCATGTGCACGAGTTTGGTGATACCAGCAACGGGTGCACGTCAGCAGGCGA 19456 |||||| |||||||||||||| ||||| || || | | || || || || || || | Sbjct 97946 GCACGGATTTCATGTGCACGAATTTGGAGACACAACAGATGGCTGTACATCTGCCGGTGC 97887 Query 19457 GCATTTTAA-CCCCAC-GCATCAACAGCATGGTGCCCCCGACGCCGCAGAGCGGCACGTT 19514 || ||||| |||||| ||| || | |||||||| || || || || |||||||| ||| Sbjct 97886 TCACTTTAACCCCCACGGCA--AAAACCATGGTGCTCCTGATGCAGCTGAGCGGCATGTT 97829 Query 19515 GGTGACCTGGGCAACGT 19531 || || || || ||||| Sbjct 97828 GGGGATCTTGGTAACGT 97812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404939440432090