Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4589 217 2e-51 seq4951 120 4e-22 >seq4589 Length=3505 Score = 217 bits (240), Expect = 2e-51 Identities = 486/723 (67%), Gaps = 15/723 (2%) Strand=Plus/Plus Query 32531 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 32590 ||||||||| || ||||| | || || | || | || || ||||| ||| || Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311 Query 32591 GACCGCGTCTGTTATAATAGATCTTAC--TGTTTCTTCACTCGGTGGAT--ACAATAAAT 32646 ||| || || || ||||| || ||| | ||||| | | ||| || ||||| | Sbjct 2312 GACGGCCTCCGTCATAATG--TCATACACTCTTTCTGCTGTAGGTTTATTGACAATG--T 2367 Query 32647 GTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGT 32706 | || || || | ||| || || ||| ||| || || || || | ||| || | |||| Sbjct 2368 GCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGT 2427 Query 32707 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG 32766 | || || || || ||||| || |||||||| || |||||||| || || ||||| | Sbjct 2428 TACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACG 2487 Query 32767 ATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG 32826 | || || ||||||| || || | || || || || | | | ||| | || | Sbjct 2488 AACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATG 2547 Query 32827 CGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 32883 | || | || |||||||| | |||||||| |||||||| || || |||| | Sbjct 2548 CCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCG 2607 Query 32884 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 32943 | | || || ||||| | | | | || || || ||||||||||| |||| Sbjct 2608 TTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCA 2667 Query 32944 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATC 33003 |||| ||||||||| ||||||||||| |||| ||||| ||| | ||| || || || | Sbjct 2668 GAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAAC 2727 Query 33004 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTAT 33061 |||||| | || || ||||| ||||||| ||| | ||||||||| || || || Sbjct 2728 GAGCCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGAT 2785 Query 33062 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 33121 || ||||| |||||||| || |||| |||| ||||| | | ||| | | Sbjct 2786 GCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATT 2845 Query 33122 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181 || || | |||||| | | ||| || | || ||| || || || || |||||||| || Sbjct 2846 GAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGA 2905 Query 33182 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 || | || || ||||| | | ||| |||||||||||||| ||||| | | ||||| Sbjct 2906 AGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAA 2965 Query 33242 TCT 33244 ||| Sbjct 2966 TCT 2968 >seq4951 Length=3275 Score = 120 bits (132), Expect = 4e-22 Identities = 179/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || || || || || |||| ||||| | || || |||| | ||| || || |||||| Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469 || ||||| |||||| |||| | | | ||| ||||||||||| || | | || Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || || ||||| | || || || || ||| | ||||| ||| |||| | |||||||||| Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589 |||||||| || | || | || ||||| |||| | ||| ||||| |||||| Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427 Query 63590 TGCTGAGGTCTTTC 63603 | ||||||||| || Sbjct 2428 TACTGAGGTCTCTC 2441 Score = 113 bits (124), Expect = 6e-20 Identities = 307/468 (66%), Gaps = 4/468 (1%) Strand=Plus/Plus Query 62991 GTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACG 63050 ||||||| || || ||||| || | || ||||| ||||||| ||| ||| || | Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752 Query 63051 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 63110 ||| || || | || | ||||| || ||||| || |||||||| || | | Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812 Query 63111 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63170 | |||||||| | | | ||||| || || ||||| | || | || || Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872 Query 63171 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63230 | ||| | |||||| || || | ||| | || | | ||||| |||||||| || | Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932 Query 63231 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 63290 | || |||| || | ||| ||| | || | |||| || ||| || | || |||||| | Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992 Query 63291 ATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63348 | |||||||| || | ||| | | || | |||||| | || |||| | Sbjct 1993 ACTCCCCATTGGTGCCGGCGATGAACGTGCCCTTACTCCGAATACAATGAACATTGA--G 2050 Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408 ||| || || || || |||| ||||| | || || |||| | ||| || || ||||| Sbjct 2051 ACCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCC 2110 Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 63456 ||| ||||| |||||| |||| | | | ||| ||||||||||| || Sbjct 2111 CTCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633393667243600