Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 217 2e-51
seq4951 120 4e-22
>seq4589
Length=3505
Score = 217 bits (240), Expect = 2e-51
Identities = 486/723 (67%), Gaps = 15/723 (2%)
Strand=Plus/Plus
Query 32531 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 32590
||||||||| || ||||| | || || | || | || || ||||| ||| ||
Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311
Query 32591 GACCGCGTCTGTTATAATAGATCTTAC--TGTTTCTTCACTCGGTGGAT--ACAATAAAT 32646
||| || || || ||||| || ||| | ||||| | | ||| || ||||| |
Sbjct 2312 GACGGCCTCCGTCATAATG--TCATACACTCTTTCTGCTGTAGGTTTATTGACAATG--T 2367
Query 32647 GTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGT 32706
| || || || | ||| || || ||| ||| || || || || | ||| || | ||||
Sbjct 2368 GCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGT 2427
Query 32707 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG 32766
| || || || || ||||| || |||||||| || |||||||| || || ||||| |
Sbjct 2428 TACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACG 2487
Query 32767 ATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG 32826
| || || ||||||| || || | || || || || | | | ||| | || |
Sbjct 2488 AACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATG 2547
Query 32827 CGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 32883
| || | || |||||||| | |||||||| |||||||| || || |||| |
Sbjct 2548 CCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCG 2607
Query 32884 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 32943
| | || || ||||| | | | | || || || ||||||||||| ||||
Sbjct 2608 TTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCA 2667
Query 32944 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATC 33003
|||| ||||||||| ||||||||||| |||| ||||| ||| | ||| || || || |
Sbjct 2668 GAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAAC 2727
Query 33004 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTAT 33061
|||||| | || || ||||| ||||||| ||| | ||||||||| || || ||
Sbjct 2728 GAGCCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGAT 2785
Query 33062 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 33121
|| ||||| |||||||| || |||| |||| ||||| | | ||| | |
Sbjct 2786 GCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATT 2845
Query 33122 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181
|| || | |||||| | | ||| || | || ||| || || || || |||||||| ||
Sbjct 2846 GAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGA 2905
Query 33182 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
|| | || || ||||| | | ||| |||||||||||||| ||||| | | |||||
Sbjct 2906 AGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAA 2965
Query 33242 TCT 33244
|||
Sbjct 2966 TCT 2968
>seq4951
Length=3275
Score = 120 bits (132), Expect = 4e-22
Identities = 179/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409
|| || || || || |||| ||||| | || || |||| | ||| || || ||||||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469
|| ||||| |||||| |||| | | | ||| ||||||||||| || | | ||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529
|| || ||||| | || || || || ||| | ||||| ||| |||| | ||||||||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589
|||||||| || | || | || ||||| |||| | ||| ||||| ||||||
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427
Query 63590 TGCTGAGGTCTTTC 63603
| ||||||||| ||
Sbjct 2428 TACTGAGGTCTCTC 2441
Score = 113 bits (124), Expect = 6e-20
Identities = 307/468 (66%), Gaps = 4/468 (1%)
Strand=Plus/Plus
Query 62991 GTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACG 63050
||||||| || || ||||| || | || ||||| ||||||| ||| ||| || |
Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752
Query 63051 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 63110
||| || || | || | ||||| || ||||| || |||||||| || | |
Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812
Query 63111 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63170
| |||||||| | | | ||||| || || ||||| | || | || ||
Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872
Query 63171 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63230
| ||| | |||||| || || | ||| | || | | ||||| |||||||| || |
Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932
Query 63231 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 63290
| || |||| || | ||| ||| | || | |||| || ||| || | || |||||| |
Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992
Query 63291 ATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63348
| |||||||| || | ||| | | || | |||||| | || |||| |
Sbjct 1993 ACTCCCCATTGGTGCCGGCGATGAACGTGCCCTTACTCCGAATACAATGAACATTGA--G 2050
Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408
||| || || || || |||| ||||| | || || |||| | ||| || || |||||
Sbjct 2051 ACCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCC 2110
Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 63456
||| ||||| |||||| |||| | | | ||| ||||||||||| ||
Sbjct 2111 CTCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633393667243600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |