Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq10174 134 1e-26
seq210 131 1e-25
seq2251 123 2e-23
seq30086 116 3e-21
>seq10174
Length=1708
Score = 134 bits (148), Expect = 1e-26
Identities = 159/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||| | ||||| || ||||||| | || || || | |||
Sbjct 1267 ATGCAGATTTTTGTCAAAACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAACCTTCT 1208
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||| |||| ||| ||||| |||||| ||| ||||| || || || || || |||||
Sbjct 1207 GACTCTATTGAGAATGTGAAGGCAAAAATTCAA-GACAAGGAGGGTATCCCTCCGGACCA 1149
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| |||||||||| ||||| ||||||||||||| || | || ||| |||||
Sbjct 1148 GCAGCGTCTTATTTTTGCTGGCAAGCAATTAGAAGATGGGCGGTCCTTGTCCGACTACAA 1089
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| || || || ||||| ||| | |||||
Sbjct 1088 TATTCAGAAGGAGTCAACGCTTCATCTTGTGCT 1056
>seq210
Length=64943
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| |||| || || | || || | || |||||| | |
Sbjct 39482 ATGCAAATATTTGTGAAGACGCTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39541
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||| | || ||| ||||| |||||| ||||| || || |||||||| |||||
Sbjct 39542 GACTCGATAGAGAATGTGAAGGCGAAAATCCAAGACAAGGAGGGCATTCCACCGGACCAG 39601
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || || || || ||||||| ||||||| || ||| ||||||
Sbjct 39602 CAGCGTTTGATATTTGCGGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39661
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || ||||| |||||
Sbjct 39662 ATACAAAAGGAGTCGACTCTTCATTTGGTGCT 39693
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || ||||| || || | || ||| | || |||||| | |
Sbjct 39254 ATGCAAATCTTTGTGAAAACGTTGACGGGCAAGACTATTACATTGGAGGTGGAGCCAAGT 39313
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||| | || ||| ||||| || ||| ||||| || || |||||||| ||||||
Sbjct 39314 GACTCGATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 39373
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || || || || ||||||| ||| ||| || || |||||
Sbjct 39374 CAGCGTTTGATCTTTGCAGGAAAGCAGTTGGAAGATGGTCGTACTCTGTCTGACTACAAC 39433
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||||||| || || | ||||| |||||
Sbjct 39434 ATTCAAAAAGAGTCAACTTTGCATTTGGTGCT 39465
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| ||||| || || | || || | || |||||| | |
Sbjct 30826 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 30767
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||| | || ||| ||||| || ||| ||||| || || |||||||| ||||||
Sbjct 30766 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 30707
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || ||||| || || || ||||||| ||||| || || ||||||
Sbjct 30706 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 30647
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || | ||||| |||||
Sbjct 30646 ATACAAAAGGAGTCGACTTTGCATTTGGTGCT 30615
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| ||||| || || | || || | || |||||| | |
Sbjct 39938 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39997
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||| | || ||| ||||| || ||| ||||| || || |||||||| ||||||
Sbjct 39998 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 40057
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || ||||| || || || ||||||| ||||| || || ||||||
Sbjct 40058 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 40117
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || | ||||| |||||
Sbjct 40118 ATACAAAAGGAGTCGACTTTGCATTTGGTGCT 40149
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || || | || || | || |||||| || |
Sbjct 30598 ATGCAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGAGCCGAGT 30539
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||| | || ||| |||| || || | ||| ||||| || || |||||||| |||||
Sbjct 30538 GACTCGATAGAGAATGTGAAGGCGAAGATTCA-AGACAAGGAGGGCATTCCACCGGACCA 30480
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || ||||| || || || | ||||||| ||||||| || || |||||
Sbjct 30479 GCAGCGTTTGATATTTGCGGGTAAGCAGCTGGAAGATGGTCGCACTCTGTCTGACTACAA 30420
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| || || || || ||| | |||||
Sbjct 30419 CATTCAAAAGGAGTCAACTCTGCATCTTGTGCT 30387
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || || | || ||| | || |||||| | |
Sbjct 39710 ATGCAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGAGCCCAGT 39769
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| | || ||| |||| || || | ||| ||||| || || || || || || ||
Sbjct 39770 GATTCCATTGAGAATGTGAAGGCGAAGATTCA-AGACAAGGAGGGCATCCCGCCGGATCA 39828
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || ||||| || || || ||||||| ||||||| || ||| |||||
Sbjct 39829 GCAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAA 39888
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| ||||| ||||| || || ||||| |||||
Sbjct 39889 TATACAAAAGGAATCGACCCTTCATTTGGTGCT 39921
Score = 89.7 bits (98), Expect = 4e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || || | || || | || |||||| || |
Sbjct 40166 ATGCAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGAGCCGAGT 40225
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||| | || ||| |||| || || | ||| ||||| || || |||||||| |||||
Sbjct 40226 GACTCGATAGAGAATGTGAAGGCGAAGATTCA-AGACAAGGAGGGCATTCCACCGGACCA 40284
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || ||||| || || || ||||||| ||||| || || |||||
Sbjct 40285 GCAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAA 40344
Query 25178 TAT 25180
|||
Sbjct 40345 TAT 40347
>seq2251
Length=6394
Score = 123 bits (136), Expect = 2e-23
Identities = 169/234 (72%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| || || | || || ||| ||||||| | || || ||| |
Sbjct 1003 AATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCTAG 1062
Query 25058 TGACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
||| |||| ||| ||| |||| |||| ||| ||||| || || || ||||| |
Sbjct 1063 CGACTCTATTGAGAACGTCA---AAGCGAAAATTCAA-GACAAGGAGGGCATACCACCAG 1118
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||| || || |||| ||||||||||| || || || |||| || ||| | ||| |
Sbjct 1119 ACCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACT 1178
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||| |||||||| ||||| ||||| ||| | || | || ||| |||||||||
Sbjct 1179 ACAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGGAA 1232
>seq30086
Length=500
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| ||||| || || | || || | || |||||| | |
Sbjct 356 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 297
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||| | || ||| ||||| || ||| ||||| || || |||||||| ||||||
Sbjct 296 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 237
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || ||||| || || || ||||||| ||||| || || ||||||
Sbjct 236 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 177
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || | ||||| |||||
Sbjct 176 ATACAAAAGGAGTCGACTTTGCATTTGGTGCT 145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433169083862165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |