Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4589 259 5e-64 >seq4589 Length=3505 Score = 259 bits (286), Expect = 5e-64 Identities = 511/753 (68%), Gaps = 6/753 (1%) Strand=Plus/Plus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 |||||| ||||| |||||||||| |||| | ||||||||| || | |||| || Sbjct 2216 ATCAGCAACAAACCTTATGTACTGACACATTAGGCGACAATTCATGCCGATAAGATCGAC 2275 Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 ||||| || || || | ||| || || || ||||| || ||| || || Sbjct 2276 AGGTAAGGCATCTGTGAGGAATTCACATTCTATGCTGACGGCCTCCGTCATAATGTCA-- 2333 Query 93046 TACTCTACTATTTGGTG---GTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102 ||| || || | || || |||| | || | | ||| | |||| ||||||||||| Sbjct 2334 TACACT-CTTTCTGCTGTAGGTTTATTGACAATGTGCTTGAAAATTAGACACGCAAAGTC 2392 Query 93103 GGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAG 93162 ||| || | ||||| || || |||| ||| || ||||| || | ||| || | || Sbjct 2393 GGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAG 2452 Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222 || || |||||||||||||| || |||||||| ||| || || || | ||| || | Sbjct 2453 ACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAAT 2512 Query 93223 GGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAA 93282 || || || ||||| | ||| || || | ||| ||| | |||||| || | Sbjct 2513 AGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAAG 2572 Query 93283 AGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 |||||||| || || || | || || || |||| || |||||||||| |||| Sbjct 2573 TGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATC 2632 Query 93343 TCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGAC 93402 ||||| ||| || | ||||||||||| | |||||||||||||||||||| | Sbjct 2633 ACGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAAT 2692 Query 93403 ATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 ||||| | || | ||| | ||| || ||||| | ||| || | | || ||||| | Sbjct 2693 GTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTCGTT 2752 Query 93463 AGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAA 93522 | |||| || | |||||| || || || ||||| |||||||| || |||| Sbjct 2753 ACAAAAATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGCCAG 2812 Query 93523 TATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTT 93582 | || | ||||| ||| ||| |||| || || || |||||||||| ||||| || Sbjct 2813 AACATACGAAATAAAGTGTCGTTCACCATCATTGAGATTTTCCCAATCGGTAAGATCCTT 2872 Query 93583 TGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCA 93642 | | ||| || || || || |||||||| || || | ||||| || || | ||||| Sbjct 2873 CGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCTTATAGAACTCCCA 2932 Query 93643 TATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| |||||||| ||||| | | |||||| Sbjct 2933 AATGTCATGATATTGTATTGGCATCACGACAAA 2965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556651343770840