Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2251 167 4e-36 seq210 143 5e-29 seq30086 140 6e-28 seq10174 140 6e-28 seq16885 95.1 2e-14 >seq2251 Length=6394 Score = 167 bits (184), Expect = 4e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || || | ||| || | || ||||| || || ||||| ||||| || |||| Sbjct 1232 TTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 1173 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | |||||| || |||||||| ||||| || || |||| ||| ||||| |||| Sbjct 1172 AGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 1113 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411 | ||||| |||||||||||||| || || |||||| ||| || | ||| ||| | || Sbjct 1112 GTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTC-GCTAGGCTCA 1054 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | ||||||||||| || || ||||| || || || || |||||| Sbjct 1053 ACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATT 1003 >seq210 Length=64943 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || || ||||| ||||| || || || ||||| Sbjct 39708 CCACCACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGAC 39649 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| |||||||| || || ||||| | | || ||||| |||||| Sbjct 39648 AGAGTGCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGA 39589 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| || || ||||| || ||| || | ||| || || || Sbjct 39588 ATGCCCTCCTTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 39529 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || || || ||||| || ||||| ||||| Sbjct 39528 TCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || || ||||| ||||| ||||| || || || Sbjct 30372 CCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGAC 30431 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || ||||| | | || ||||| |||||| Sbjct 30432 AGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGA 30491 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||||||||| ||||| || ||| || | ||| | || || Sbjct 30492 ATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACC 30551 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || ||||| || ||||| || ||||| ||||| Sbjct 30552 TCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || | || ||||| ||||| || || || || || Sbjct 30600 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 30659 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| |||||||| |||||||| || | | |||||||| |||||| Sbjct 30660 AAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGA 30719 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||| || ||| || | ||| || || || Sbjct 30720 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 30779 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || || | ||||| || ||||| ||||| Sbjct 30780 TCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || | || ||||| ||||| || || || || || Sbjct 40164 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 40105 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| |||||||| |||||||| || | | |||||||| |||||| Sbjct 40104 AAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGA 40045 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||| || ||| || | ||| || || || Sbjct 40044 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 39985 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || || | ||||| || ||||| ||||| Sbjct 39984 TCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || | || ||||||||||| ||||| || || || Sbjct 39480 CCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGAC 39421 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| |||||||| || || || || | | |||||||| |||||| Sbjct 39420 AGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGA 39361 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||| || ||| || | ||| || || || Sbjct 39360 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACC 39301 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || || ||||| | || || || || || ||||| Sbjct 39300 TCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || || || || ||||| || || || ||||| Sbjct 30828 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 30887 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| |||||||| |||||||| || | | || || || || || Sbjct 30888 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 30947 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||||||||| ||||| || ||| |||| || | || ||| Sbjct 30948 ATGCCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACT 31007 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||| || || || || ||||| || ||||| || || || ||||| ||| Sbjct 31008 TCCAGAGTAATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCATGATG 31058 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| ||||| || || || ||||| ||||| ||||| || || || || || | || Sbjct 42386 CGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGACCG 42327 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 || || ||||| || || || || ||||| | ||||||||| ||||||||||| |||||| Sbjct 42326 TCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCTTG 42267 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || |||||||| ||||| || ||| || | || | || || |||| ||| || Sbjct 42266 TCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGGGTAATC 42207 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || || |||||||| || ||||| Sbjct 42206 GTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || || || || ||||| || || || ||||| Sbjct 39936 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 39877 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| |||||||| |||||||| || | | || || || || || Sbjct 39876 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 39817 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||||||||| ||||| || ||| |||| || | || || Sbjct 39816 ATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACC 39757 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || ||||| || ||||| ||||| Sbjct 39756 TCCAGTGTAATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 123 bits (136), Expect = 5e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| |||||||| |||||||| || | | || ||||| ||||||||||| ||| Sbjct 40323 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGGTCCGGTGGAATGCCCTCC 40264 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||||||||| ||||| || ||| || | ||| | || || |||||||| Sbjct 40263 TTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTA 40204 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||| || ||||| || ||||| ||||| Sbjct 40203 ATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 40166 >seq30086 Length=500 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || | || ||||| ||||| || || || || || Sbjct 130 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 189 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| |||||||| |||||||| || | | |||||||| |||||| Sbjct 190 AAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGA 249 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||| || ||| || | ||| || || || Sbjct 250 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 309 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || || | ||||| || ||||| ||||| Sbjct 310 TCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || || || || ||||| || || || ||||| Sbjct 358 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 417 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| |||||||| |||||||| || | | || || || || || Sbjct 418 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 477 Query 68355 ATGCCTTCCTTGTCTTGAATCTT 68377 ||||| ||||||||||||||||| Sbjct 478 ATGCCCTCCTTGTCTTGAATCTT 500 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| ||||||||||| ||||||||||||||||| ||||| || ||| || | | Sbjct 7 TGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAG 66 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | || || |||||||| || || || ||||| || ||||| || ||||| ||| Sbjct 67 TCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGC 126 Query 68460 AT 68461 || Sbjct 127 AT 128 >seq10174 Length=1708 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || ||||| ||||| || || || || || ||||| Sbjct 1041 CCACCACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGAC 1100 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | | || |||||||||||| ||||| || || || || || | || ||||| || || Sbjct 1101 AAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGG 1160 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||||||||| |||||||| || ||| || | ||| | | ||| || Sbjct 1161 ATACCCTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACC 1220 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||| || ||||| || |||||||| Sbjct 1221 TCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 >seq16885 Length=993 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 268366 AGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGAT 268425 ||||||||||| ||||| || || || || | | || ||||||||||| || || || Sbjct 851 AGTGATTTTTCTCGTCACAAATGTTTCACCCCTACGTGGACTCTCGTGGTTAAAAAGAAT 910 Query 268426 GCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAA 268485 ||||||||||| ||||| |||| | ||||| || || || || ||||||| ||| | Sbjct 911 ACCGTTGCACGCAAACATATCATAGGATTCACGATAATTTACAACAATCCAGTAGGCATA 970 Query 268486 CATCTTTGCAAC 268497 || |||||| || Sbjct 971 CAGCTTTGCCAC 982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921275743254520