Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq210 109 5e-19 seq10174 105 6e-18 seq2251 104 2e-17 seq30086 93.3 4e-14 >seq210 Length=64943 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | || ||||| | || || ||||||||||||||||| || Sbjct 39483 ATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCA 39424 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||||| |||||| | || || || || |||| | ||||||||||||||| Sbjct 39423 GACAGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGT 39364 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | |||| | ||| | | || Sbjct 39363 GGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCC 39304 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| |||| ||||| ||||| || ||||| Sbjct 39303 ACCTCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || |||||||||||||| || || ||| ||| || || Sbjct 42380 ACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGACCGTCCTCC 42321 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | ||||||||||| |||||||||| ||||||||||| |||||||| || ||||| | Sbjct 42320 AACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGA 42261 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | | || | | || || |||| ||| | ||| ||| Sbjct 42260 ATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGGGTAATCGTCTTG 42201 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || |||||||| || || || ||||| Sbjct 42200 CCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| || | | || | ||| | || || || |||||||||||||| || Sbjct 30371 ACCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGA 30430 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| ||| |||||| || || ||||| || | || | |||||| |||||||| || Sbjct 30431 CAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGG 30490 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||| || ||||| |||||| || | | || | | ||| | | || || Sbjct 30491 AATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCAC 30550 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||| ||| | || || || || || || || ||||| || |||||| Sbjct 30551 CTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCATG 30599 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | || ||||| | || || || ||||| || ||||| || Sbjct 30597 ATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCA 30656 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||| | || ||||| ||| |||| | ||||||||||||||| Sbjct 30657 GACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGT 30716 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | | ||| | | || Sbjct 30717 GGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCC 30776 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | ||| ||||| |||| || || ||||| || |||||| Sbjct 30777 ACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 30827 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | || ||||| | || || || ||||| || ||||| || Sbjct 40167 ATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCA 40108 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||| | || ||||| ||| |||| | ||||||||||||||| Sbjct 40107 GACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGT 40048 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | | ||| | | || Sbjct 40047 GGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCC 39988 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | ||| ||||| |||| || || ||||| || |||||| Sbjct 39987 ACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 39937 >seq10174 Length=1708 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || | ||| | ||| || || || ||||| ||||| ||| Sbjct 1040 ACCACCACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGA 1099 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || | || |||||| | ||| || ||||| | || |||||||| ||||||||||| Sbjct 1100 CAAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGG 1159 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| ||| ||| || | | |||| | ||| | | ||| || Sbjct 1160 GATACCCTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAAC 1219 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || |||||||| |||||||| |||||||||||||| Sbjct 1220 CTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 >seq2251 Length=6394 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || |||||||||||||| | ||| | ||| ||||| |||||||||||||| ||| Sbjct 1230 CCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAG 1171 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || ||| || | || || || || |||| || || || ||||| || || Sbjct 1170 AGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGT 1111 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| ||| || ||| | | |||| | |||| | | || || Sbjct 1110 ATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACC 1051 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||| || || || ||||| |||||||| ||||| Sbjct 1050 TCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 >seq30086 Length=500 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | || ||||| | || || || ||||| || ||||| || Sbjct 127 ATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCA 186 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||| | || ||||| ||| |||| | ||||||||||||||| Sbjct 187 GACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGT 246 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | | ||| | | || Sbjct 247 GGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCC 306 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | ||| ||||| |||| || || ||||| || |||||| Sbjct 307 ACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419980322404692