Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 131 3e-25
seq4589 102 2e-16
>seq4951
Length=3275
Score = 131 bits (144), Expect = 3e-25
Identities = 268/394 (68%), Gaps = 16/394 (4%)
Strand=Plus/Plus
Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062
||||||| |||||| || ||||||||||| || || |||| || || || | | |
Sbjct 1773 ACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGAAAAGATCTCTTGCACGAATC 1832
Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122
|| || | |||||||||||||| || |||| ||| | | || || ||||| |||
Sbjct 1833 TCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCAGTACATCTGGATGCCATGGC 1892
Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG 245182
|| | ||||||||||| |||||| || || ||||| || || ||||| | | | ||
Sbjct 1893 TCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCACCTTGGTCTA----CATAACG 1948
Query 245183 AGC---GC-GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238
||| || |||||||| ||||| | || || | || || || | || ||||||||
Sbjct 1949 AGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCGACTCCCCATTGGTGCC 2008
Query 245239 CTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGG 245294
|||| | | |||||| | || | | | ||| |||| || | || || |
Sbjct 2009 GGCGATGAACGTGCCCTTACTCC---GAATAC-AATGAACATTGAGACCGATCCCACCCG 2064
Query 245295 CGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCG 245354
| |||||||| ||||| || |||| ||||| ||||||||| || |||||
Sbjct 2065 CACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCCTCAATACTGTCAT 2124
Query 245355 ACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388
|||||| ||| || ||||||| |||| |||
Sbjct 2125 CCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158
>seq4589
Length=3505
Score = 102 bits (112), Expect = 2e-16
Identities = 239/358 (67%), Gaps = 2/358 (1%)
Strand=Plus/Minus
Query 42500 TGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTA 42559
|||||| || || || || || | || | ||| | |||||| | || ||||| ||||
Sbjct 2735 TGAGGCTCGTTGTTTTTATGGAATGCAAGTGGCCGTTGAGAACATTCATTCTGAAATGTA 2676
Query 42560 CGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGC 42619
| ||| || | || || || ||| || | |||||| | | || || ||
Sbjct 2675 TTCTCTTCTGATCGATACATATGTCAAGGACCCGGCAGAGCGTGATTTTTTATTTAACGC 2616
Query 42620 CATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAG 42679
||| | ||| |||| ||| || ||||||||||| ||||| || || ||||||| ||
Sbjct 2615 CATTCAAACGCTGCCATGCGTCGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAA 2556
Query 42680 TCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTT 42739
| ||| ||| || ||| | |||| || || | || | ||||| | |||||
Sbjct 2555 TAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTTTCTT 2496
Query 42740 CTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCA 42798
||| || | || || || || || ||||||||| || ||| || ||||| || || |
Sbjct 2495 CTCCGGTTCGTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTC-ATGCCTGGTCTTA 2437
Query 42799 CCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCT 42856
||||| ||||| || ||||| | || || || || || | |||||||| || ||
Sbjct 2436 CCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCT 2379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943983998614160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |