Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq10174 102 6e-17 >seq10174 Length=1708 Score = 102 bits (112), Expect = 6e-17 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || ||||| ||||||||||| |||||||||||| ||||| || | ||| ||| Sbjct 1050 AGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGC 1109 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || ||||||||||| ||||| || || |||||||| ||| || | | ||| Sbjct 1110 CCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCC 1169 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTA---TCAGTAGATTCGCATTCGACC 34086 ||||| ||||||| ||| | | || || || |||| || ||| || | Sbjct 1170 TTGTCTTGAATTTTTGCCTTCA---CATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGG 1226 Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || || || ||||| || ||||| ||||| || ||||| Sbjct 1227 GTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396916783692982