Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq210 127 5e-24
seq10174 122 2e-22
seq2251 116 9e-21
>seq210
Length=64943
Score = 127 bits (140), Expect = 5e-24
Identities = 168/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || |||| || || | ||||| || || ||||| ||||| ||||
Sbjct 39712 CATG-CCACCACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGT 39654
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| || ||||| || || || || || || |||| |||||| ||
Sbjct 39653 CGGACAGAGTGCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCG 39594
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||| || || || || || ||||||||||| ||||| || ||||| || || || | |
Sbjct 39593 GTGGAATGCCCTCCTTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCT 39534
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | || |||||||| || ||||| ||||| || ||||| |||||
Sbjct 39533 CCACCTCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482
>seq10174
Length=1708
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || ||||||| ||| || || || ||||| |||||||
Sbjct 1041 CCACCACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGAC 1100
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| | || || ||||||||||| || || || || || |||||||| || |||
Sbjct 1101 AAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGG 1160
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || || ||||| || ||||| || || ||||| || | ||| ||
Sbjct 1161 ATACCCTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACC 1220
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| ||||| ||||| ||||| || ||||||||
Sbjct 1221 TCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267
>seq2251
Length=6394
Score = 116 bits (128), Expect = 9e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || || ||||| | || ||||| | ||| ||| ||||| || || |||||||
Sbjct 1231 TCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGA 1172
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || || || || || || || || || || ||||| || || || || |||
Sbjct 1171 GAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 1112
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || || || ||||||||||| ||||| || ||||| ||||| | || ||
Sbjct 1111 TATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAAC 1052
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || ||||| || ||||| || || || || || || || ||||||
Sbjct 1051 CTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATT 1003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179199594936698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |