Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq210 129 6e-25 seq2251 122 9e-23 seq30086 113 5e-20 seq10174 89.7 6e-13 >seq210 Length=64943 Score = 129 bits (142), Expect = 6e-25 Identities = 170/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41977 ATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAAT 42036 ||| ||| || | | ||| | ||| | ||||| || |||||||||||| ||||| | Sbjct 30367 ATCAACCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGT 30426 Query 42037 CAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGG 42096 ||| |||||| || | || || ||||||||||| || ||||| | ||||||||||| | Sbjct 30427 CAGACAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCG 30486 Query 42097 CTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGAT 42155 ||| | || |||||||| | ||| | || | || | || | | || ||| |||| Sbjct 30487 GTGGAATGCCCTCCTTGT-CTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGC 30545 Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 ||||| || | || || || || ||||| |||||||| ||||| |||||||| Sbjct 30546 TCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || |||| ||||||| ||||||||| | || |||||||||||| ||||| || | | Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || |||| || | ||| |||||||| || ||||| || || ||||| | ||| Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || |||||||||| ||| | || | || | || | | || || |||| ||||| Sbjct 42278 ATGCCCTCCTTGTCC-TGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCAC 42220 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 || | || || || ||||| || || || || || ||||||||||| Sbjct 42219 CTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||||||| | || ||||||||| |||||||| || | |||||| || | || || Sbjct 39691 CACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 39632 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | ||||||||| || ||||| | ||||||||||| | ||| | || ||||||||| Sbjct 39631 CAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTG 39572 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| || | || | | || ||| || | ||||| || | || || || || Sbjct 39571 GATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 39512 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 ||| || |||||||| ||||| |||||||| Sbjct 39511 GCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||||||||| || ||||||||| |||||||| |||| || || || | || || Sbjct 30617 CACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTC 30676 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | ||||||||| ||||| || | ||||| ||||| | ||| | || ||||||||| Sbjct 30677 CAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 30736 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 30737 GATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 30796 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 ||| || | |||||| ||||| |||||||| Sbjct 30797 GCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||||||||| || ||| |||||||| ||||| |||| |||||| || | || || Sbjct 39463 CACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTC 39404 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | |||||| || || || || | ||||| ||||| | ||| | || ||||||||| Sbjct 39403 CAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 39344 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 39343 GATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTCTT 39284 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 |||||| | ||| || |||||||||||||| Sbjct 39283 GCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||||||||| || ||||||||| |||||||| |||| || || || | || || Sbjct 40147 CACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTC 40088 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | ||||||||| ||||| || | ||||| ||||| | ||| | || ||||||||| Sbjct 40087 CAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 40028 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 40027 GATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 39968 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 ||| || | |||||| ||||| |||||||| Sbjct 39967 GCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||||||| | || |||||||| |||||||| || | |||||| || | || || Sbjct 30845 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 30904 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | ||||||||| ||||| || | |||||||| || | || | || ||||||||| | Sbjct 30905 CAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCT-T 30963 Query 42119 GATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 || | || | || | || | | | || || | || || || | || || || | Sbjct 30964 GAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCT 31023 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 | |||||||||||||| |||||||||||||| Sbjct 31024 TCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||||||| | || |||||||| |||||||| || | |||||| || | || || Sbjct 39919 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 39860 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | ||||||||| ||||| || | |||||||| || | || | || ||||||||| | Sbjct 39859 CAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCT-T 39801 Query 42119 GATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 || | || | || | || | | | || || | ||||| || | || || || | Sbjct 39800 GAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCT 39741 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 |||| ||||||||||| ||||| |||||||| Sbjct 39740 TGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 42027 ATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGC 42086 |||||||| |||| || || || | || || | ||||||||| ||||| || | ||| Sbjct 40347 ATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGC 40288 Query 42087 TGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGT 42145 |||||||| | ||| | || |||||||| | ||| | || | || | || | | || Sbjct 40287 TGCTGGTCCGGTGGAATGCCCTCCTTGT-CTTGAATCTTCGCCTTCACATTCTCTATCGA 40229 Query 42146 GTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTG 42205 ||| |||| ||||| || | || || || || ||||| |||||||| ||||| ||||| Sbjct 40228 GTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTG 40169 Query 42206 CAt 42208 ||| Sbjct 40168 CAT 40166 >seq2251 Length=6394 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| || | ||| || | ||| | || ||||||||||| ||||| || | Sbjct 1230 CCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAG 1171 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| ||| | || || | |||||| || || || || ||||| |||||||| | ||| Sbjct 1170 AGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGT 1111 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||||||||| ||| |||| | ||||| || | | | |||||| | || || Sbjct 1110 ATGCCCTCCTTGTCT-TGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAAC 1052 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAtttt 42211 || | ||||||||||| || || || || || ||||| ||||||||||| Sbjct 1051 CTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq30086 Length=500 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||||||||| || ||||||||| |||||||| |||| || || || | || || Sbjct 147 CACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTC 206 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | ||||||||| ||||| || | ||||| ||||| | ||| | || ||||||||| Sbjct 207 CAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 266 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 267 GATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 326 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAt 42208 ||| || | |||||| ||||| |||||||| Sbjct 327 GCCAGTCAACGTCTTCACAAATATTTGCAT 356 >seq10174 Length=1708 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||||||||| || | || | |||| | || |||| ||||| ||||| || Sbjct 1076 CTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAA 1135 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||||||||| | || | | |||||||| | ||| |||||| || | Sbjct 1136 AATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGT-CTTGAATTTTTGCCTTCACAT 1194 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 || | | | ||| | ||| || || | |||||||| ||||| || || || || | Sbjct 1195 TCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGA 1254 Query 42196 CAAAGATTTGCAt 42208 |||| || ||||| Sbjct 1255 CAAAAATCTGCAT 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543008477295440