Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq10174 127 2e-24 seq2251 118 1e-21 seq210 116 4e-21 >seq10174 Length=1708 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||||| ||| || || || ||||| ||||| || | | || ||| | || Sbjct 1055 AAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATC 1114 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||||| ||| |||| || ||||||||||| ||||| || || || || || Sbjct 1115 TTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTC 1174 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| |||||| ||| ||| ||| | | ||| | || || || | || | ||| Sbjct 1175 TTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGT 1234 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | |||||| || ||||| ||||| Sbjct 1235 CTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 >seq2251 Length=6394 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | ||| | || ||||| | ||||||||| |||||||||||||| || | | Sbjct 1230 CCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAG 1171 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || ||| | || || | ||||||||||||| | || || || |||||||| || || Sbjct 1170 AGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGT 1111 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| | |||| ||||| || ||| | | || | | || || Sbjct 1110 ATGCCCTCCTTGTCTTG-AATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAAC 1052 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447 || | ||| | ||| || || || | ||||| || ||||||||||||||| Sbjct 1051 CTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTTA 1000 >seq210 Length=64943 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || ||||| | ||||| | ||||| || || || |||||||||||||| || | Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || | ||| || || ||| | ||||| || || ||||| || ||| Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCCAC 64395 || || || || || || || || ||| ||| ||| | | ||||| |||| ||||| Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGC-TCCAC 42220 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | |||||| ||||| |||||||| Sbjct 42219 CTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | |||||| ||||| | || || || |||||||||||||| || | Sbjct 30371 ACCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGA 30430 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| |||||||| || ||| | || | ||||||||||| || || Sbjct 30431 CAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGG 30490 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCCA 64394 ||| || || || ||||| || || ||| ||| ||| | | |||| |||| |||| Sbjct 30491 AATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGC-TCCA 30549 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||||| || || | || || || || |||||||| Sbjct 30550 CCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | || |||||| | ||| | || || ||||||||||||||||| || | Sbjct 39480 CCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGAC 39421 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | ||||| | |||||| || ||| | || | ||||| ||||| || ||| Sbjct 39420 AGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGA 39361 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || ||||| || || ||| ||| ||| | | |||| | ||||| Sbjct 39360 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACC 39301 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| ||||| ||||| || || |||||||| Sbjct 39300 TCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||||| ||||| || ||||| || ||||| || | | ||||| | ||| Sbjct 39693 AGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCT 39634 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| || ||| | || | ||||||||||| || ||||| || || || ||| Sbjct 39633 TCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 39574 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| ||| | | |||| | ||||| || | || | ||| Sbjct 39573 TGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTC 39514 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| || || || || |||||||| Sbjct 39513 TTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499456864854040