Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq210 136 4e-27
seq2251 107 2e-18
seq10174 96.9 3e-15
seq4589 87.8 2e-12
seq30086 82.4 8e-11
>seq210
Length=64943
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| ||||||||||||| || ||||| | | |||||||||||||||||||||||||
Sbjct 42399 GCCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGA 42340
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| ||| || |||||| | |||||||| | | |||| ||||| ||||||||||| ||
Sbjct 42339 CAGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGG 42280
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| | || | || | | || | | || ||| |||||
Sbjct 42279 AATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCA 42221
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | ||| || ||||| |||||||| || || || |||||
Sbjct 42220 CCTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 138385 CAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCG 138444
|| ||||| || | ||| | || | ||| | |||||||||||||||||||||||||
Sbjct 30369 CAACCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCA 30428
Query 138445 CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504
|| ||| || || || || || ||||| | | | || | |||||| ||||||||
Sbjct 30429 GACAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGT 30488
Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTC 138563
|| || || || ||||| ||| | || | || | | || | | ||| ||| |||
Sbjct 30489 GGAATGCCCTCCTTGTC-TTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTC 30547
Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||||| | || | || || || || || || || ||||| || ||||||
Sbjct 30548 CACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCATG 30599
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| || ||||||||| || ||| || || || | || ||||| | |
Sbjct 39675 GACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTACCCGCA 39616
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || | |||||| |||||||| || || || || ||||| |||||| || |
Sbjct 39615 AATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATTTTCGCCTTCACA 39556
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | | ||| | | ||||||||| | || | ||| || |||||||| || ||
Sbjct 39555 TTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTC 39496
Query 138601 ACAAAAATCTGCATG 138615
||||| || ||||||
Sbjct 39495 ACAAATATTTGCATG 39481
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465
|| ||||| | ||||||| ||||||||||||||||| || |||||| || ||
Sbjct 39462 ACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTCC 39403
Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525
| || || || | | |||| | ||||||||||||||| || || || || ||||| |
Sbjct 39402 AACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGG 39343
Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585
|| || || | | || | | ||| | | ||||||||| | || | || ||
Sbjct 39342 ATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTCTTG 39283
Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| |||| ||||| ||||| || |||||
Sbjct 39282 CCCGTCAACGTTTTCACAAAGATTTGCAT 39254
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| || |||||||| || || || || || | || |||||||
Sbjct 30633 GACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCG 30692
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||||| ||||||||||||||| || || || || ||||| ||| || || |
Sbjct 30693 AAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACA 30752
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | | ||| | | ||||||||| | || | ||| || ||||||| || ||
Sbjct 30753 TTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTC 30812
Query 138601 ACAAAAATCTGCATG 138615
||||| || ||||||
Sbjct 30813 ACAAATATTTGCATG 30827
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| || |||||||| || || || || || | || |||||||
Sbjct 40131 GACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCG 40072
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||||| ||||||||||||||| || || || || ||||| ||| || || |
Sbjct 40071 AAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACA 40012
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | | ||| | | ||||||||| | || | ||| || ||||||| || ||
Sbjct 40011 TTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTC 39952
Query 138601 ACAAAAATCTGCATG 138615
||||| || ||||||
Sbjct 39951 ACAAATATTTGCATG 39937
>seq2251
Length=6394
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | | |||||| | ||| | | || |||||||||||||||||||||
Sbjct 1230 CCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAG 1171
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| ||| ||||| | || || |||| | |||| || || || ||||| || |||
Sbjct 1170 AGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGT 1111
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| |||| | ||| | | || | | |||| | | ||| ||
Sbjct 1110 ATGCCCTCCTTGTC-TTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAAC 1052
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | ||||| ||||| || ||||| |||||||| |||||
Sbjct 1051 CTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004
>seq10174
Length=1708
Score = 96.9 bits (106), Expect = 3e-15
Identities = 141/197 (72%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
|||||||||| ||||| ||||||||| || | ||| || || | ||| || || |
Sbjct 1072 TTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTCTAATTGCTTGCCAG 1131
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537
| | || |||||||| ||||||||||| ||||| || ||||| ||| |||||| ||
Sbjct 1132 CAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTC-TTGAATTTTTGCCTTC 1190
Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597
| | || | | ||| | | || ||||| | || | || || || || ||||||
Sbjct 1191 ACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTT 1250
Query 138598 TTTACAAAAATCTGCAT 138614
|| ||||||||||||||
Sbjct 1251 TTGACAAAAATCTGCAT 1267
>seq4589
Length=3505
Score = 87.8 bits (96), Expect = 2e-12
Identities = 157/227 (69%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 52327 TGCCGTGCGTTCGCAAA-AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385
|||| ||||| ||| || ||||| | |||||| | |||||||||| || | | ||
Sbjct 2604 TGCCATGCGT-CGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAATAAGAGGGCA 2546
Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445
|| || ||||| ||||||| ||||| | ||||| || || || |||||
Sbjct 2545 TCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTTTCTTCTCCGGTTCG 2486
Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505
||||| | || |||| | || | | || | ||||| || || || ||||| |||
Sbjct 2485 TTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCAGTAAC 2426
Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT 52552
||| |||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct 2425 GAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCT 2379
>seq30086
Length=500
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| || |||||||| || || || || || | || |||||||
Sbjct 163 GACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCG 222
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||||| ||||||||||||||| || || || || ||||| ||| || || |
Sbjct 223 AAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACA 282
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | | ||| | | ||||||||| | || | ||| || ||||||| || ||
Sbjct 283 TTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTC 342
Query 138601 ACAAAAATCTGCATG 138615
||||| || ||||||
Sbjct 343 ACAAATATTTGCATG 357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496075737101520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |