Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq210 120 2e-22 seq2251 118 8e-22 seq10174 91.5 1e-13 seq30086 87.8 1e-12 >seq210 Length=64943 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||||||| | | || ||||||||||| || || ||||| |||||||| || Sbjct 42400 TGCCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCG 42341 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | |||| || || ||||| ||||| | || | ||| |||||||| || Sbjct 42340 ACAGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTG 42281 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| ||| || || ||| | ||||| | ||| || || | Sbjct 42280 GAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCA 42221 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | |||||| || || || || |||||||| || || |||||||| Sbjct 42220 CCTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || | || |||||||| || || || |||||||| ||||| ||| Sbjct 39710 TGCCACCACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGG 39651 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | ||||| || || || || || ||||||||||||| ||||| || Sbjct 39650 ACAGAGTGCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTG 39591 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| ||||| || ||| | ||||| | || || || | Sbjct 39590 GAATGCCCTCCTTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCA 39531 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || |||||||| || || || ||||| || || ||||| |||||||| Sbjct 39530 CCTCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || | || ||||||||||| || || |||||||| ||||| ||| Sbjct 30826 TGCCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGG 30885 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | ||||| || || || || ||| | || |||||||| || || | Sbjct 30886 ACAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCG 30945 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || || |||||||| ||| || |||||| | || || | ||| || || | Sbjct 30946 GGATGCCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAA 31005 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||||| || || || || || || || ||||| |||||||| Sbjct 31006 CTTCCAGAGTAATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || | || ||||| | || || |||||||| |||||||| || Sbjct 39482 TGCCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAG 39423 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | ||||| || || || || || | ||||||||||||||||| || Sbjct 39422 ACAGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTG 39363 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| || || || ||| | || || | || || || | Sbjct 39362 GAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCA 39303 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| || || || |||| ||||| ||||| |||||||| Sbjct 39302 CCTCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || ||||| |||||||| || ||| | | | ||||| | || Sbjct 30395 ATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCTTCCAGCTG 30454 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || || ||||||||||||| ||||| |||||| || |||||||| ||| || Sbjct 30455 CTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTT 30514 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||| | ||||| | || || || || || |||||||| || || || || Sbjct 30515 CGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGT 30574 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| |||||||| Sbjct 30575 AAGCGTCTTCACAAATATTTGCAT 30598 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || | || ||||||||||| || || |||||||| ||||| ||| Sbjct 39938 TGCCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGG 39879 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | ||||| || || || || ||| | || |||||||| || || | Sbjct 39878 ACAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCG 39819 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || || |||||||| ||| || || ||| | || || | ||| || || | Sbjct 39818 GGATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCA 39759 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||||| || || || || || || || ||||| |||||||| Sbjct 39758 CCTCCAGTGTAATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || | || ||||| | || || || |||||||| ||||| || Sbjct 30598 TGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCA- 30656 Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 || || || | ||||| || || || || ||| | || |||||||||||||| Sbjct 30657 -GACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGG 30715 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 |||||| || |||||||| || || || ||| | ||||| | || || || Sbjct 30716 TGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTC 30775 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| || || || |||| || || ||||| |||||||| Sbjct 30776 CACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || | || ||||| | || || || |||||||| ||||| || Sbjct 40166 TGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCA- 40108 Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 || || || | ||||| || || || || ||| | || |||||||||||||| Sbjct 40107 -GACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGG 40049 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 |||||| || |||||||| || || || ||| | ||||| | || || || Sbjct 40048 TGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTC 39989 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| || || || |||| || || ||||| |||||||| Sbjct 39988 CACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 >seq2251 Length=6394 Score = 118 bits (130), Expect = 8e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 14947 CTGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCG 15006 || || ||||| | ||| ||||| | ||| || || || || ||||| |||||||| ||| Sbjct 1233 CTTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCG 1174 Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 |||| ||| | | || || || || ||||| || | || | || || ||||| | Sbjct 1173 GAGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGT 1114 Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 || || || |||||||| |||||| ||| || | || |||| |||||| || Sbjct 1113 GGTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCA 1054 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || | || |||||||| || || || ||||| |||||||||||||| || Sbjct 1053 ACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq10174 Length=1708 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--TCTTCTAAT 15030 |||||| || || || || || || ||||| ||| || || ||| ||||||||| Sbjct 1064 ATGAAGCGTTGACTCCTTCTGAATATTGTAGTCG--GACAAGGACCGCCCATCTTCTAAT 1121 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 || |||||||| | || | |||||| ||||| || || || |||||||| |||| Sbjct 1122 TGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGAATT 1181 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 || || ||| | || |||| || | ||| || || | ||| ||||| || || Sbjct 1182 TTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCG 1241 Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||||||| |||||||| ||||| Sbjct 1242 GTGAGAGTTTTGACAAAAATCTGCAT 1267 >seq30086 Length=500 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | || | || ||||| | || || || |||||||| ||||| || Sbjct 128 TGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCA- 186 Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 || || || | ||||| || || || || ||| | || |||||||||||||| Sbjct 187 -GACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGG 245 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 |||||| || |||||||| || || || ||| | ||||| | || || || Sbjct 246 TGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTC 305 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| || || || |||| || || ||||| |||||||| Sbjct 306 CACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357260932179935