Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq210 123 2e-23 seq30086 105 6e-18 seq10174 105 6e-18 seq2251 96.9 3e-15 >seq210 Length=64943 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || ||||| ||||| |||||||| ||| | Sbjct 39708 CCACCACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGAC 39649 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | ||| || || || | ||||| |||||||| || || || Sbjct 39648 AGAGTGCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGA 39589 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||||||| ||| | | || | | ||| | ||| || Sbjct 39588 ATGCCCTCCTTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 39529 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | ||| ||||| ||||| || || ||||| || |||||| Sbjct 39528 TCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCATG 39481 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || |||||||||||||| ||||| || | Sbjct 39480 CCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGAC 39421 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | ||| ||||| || ||||||| ||||| || || || || Sbjct 39420 AGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGA 39361 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| ||| ||| | | || | | ||| | ||| || Sbjct 39360 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACC 39301 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||| ||||| ||||| || ||||| Sbjct 39300 TCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || ||||| ||||| |||||||| || | Sbjct 30600 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 30659 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||| || ||||| || || || || Sbjct 30660 AAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGA 30719 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| ||| ||| | | || | | ||| | ||| || Sbjct 30720 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 30779 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | ||| ||||| |||| || || ||||| || |||||| Sbjct 30780 TCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 30827 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || || || ||||| |||||||| ||| | Sbjct 39936 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 39877 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | ||| || || ||| |||| || ||||||||||| || || Sbjct 39876 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 39817 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| || ||| ||| | | || | || || | ||| || Sbjct 39816 ATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACC 39757 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || ||||| || || || || ||||| || |||||| Sbjct 39756 TCCAGTGTAATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCATG 39709 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || ||||| ||||| |||||||| || | Sbjct 40164 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 40105 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||| || ||||| || || || || Sbjct 40104 AAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGA 40045 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| ||| ||| | | || | | ||| | ||| || Sbjct 40044 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 39985 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | ||| ||||| |||| || || ||||| || |||||| Sbjct 39984 TCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 39937 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || |||| ||||||||| | || ||||| |||||||| ||||| || | Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || | |||||| ||||| |||| | || || || || || || Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || ||| ||| | | || | | || | ||| || Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| ||||| || |||||||| || || || ||||| Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || || || ||||| |||||||| ||| | Sbjct 30828 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 30887 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | ||| || || ||| |||| || ||||||||||| || || Sbjct 30888 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 30947 Query 127007 ATGCCCTCCTTGTC 127020 |||||||||||||| Sbjct 30948 ATGCCCTCCTTGTC 30961 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | || ||||| |||||||| ||||| || || |||||| ||| || Sbjct 30389 CACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCTTC 30448 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || || | ||||| |||||||| || || || |||||||||||||| Sbjct 30449 CAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTG 30508 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || ||| ||| | | || | | ||| | ||| || || | ||| | || || Sbjct 30509 AATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCTT 30568 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || || || || ||||| || |||||| Sbjct 30569 CCCCGTAAGCGTCTTCACAAATATTTGCATG 30599 >seq30086 Length=500 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || ||||| ||||| |||||||| || | Sbjct 130 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 189 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||| || ||||| || || || || Sbjct 190 AAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGA 249 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| ||| ||| | | || | | ||| | ||| || Sbjct 250 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 309 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | ||| ||||| |||| || || ||||| || |||||| Sbjct 310 TCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 357 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||||||| | || || || ||||| |||||||| ||| | Sbjct 358 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 417 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | ||| || || ||| |||| || ||||||||||| || || Sbjct 418 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 477 Query 127007 ATGCCCTCCTTGTC 127020 |||||||||||||| Sbjct 478 ATGCCCTCCTTGTC 491 >seq10174 Length=1708 Score = 105 bits (116), Expect = 6e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 126883 TGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATC 126942 ||| ||||| || | || | ||| | ||| | ||| ||||| || ||||||||||| || Sbjct 1037 TGCACCACCACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTC 1096 Query 126943 GCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002 | || | || ||| |||| || || ||||| | || | |||||||| || || Sbjct 1097 GGACAAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGG 1156 Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCT 127061 ||| || |||||||||| | ||| ||| || ||| | | || | | ||| | | | Sbjct 1157 AGGGATACCCTCCTTGT-CTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTT 1215 Query 127062 CGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || | ||| | || |||||||| |||||||| |||||||||||||| Sbjct 1216 CAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 >seq2251 Length=6394 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || |||| || ||| || | ||| | ||| || || |||||||| ||||| ||| Sbjct 1231 TCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGA 1172 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || | ||| || || || |||| | ||| ||||| || || || Sbjct 1171 GAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 1112 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| |||||| |||| | || | | ||| || ||| || Sbjct 1111 TATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAAC 1052 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || || ||||| |||||||| ||||| Sbjct 1051 CTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475321946317840