Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2251 138 1e-27 seq10174 98.7 9e-16 seq210 93.3 4e-14 >seq2251 Length=6394 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| || || ||||| || ||||| ||||| ||||||||||| || || || ||| Sbjct 1232 TTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 1173 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || ||| ||| ||||| || || || || | || | |||||||||||| || | Sbjct 1172 AGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 1113 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 | ||||| || || ||||||||||| ||||| || | || | | |||| || ||| Sbjct 1112 GTATGCCCTCCTTGTCTTGAATTTTCGCTTTGA-CGTTCTCAATAGAGTCGCTAGGCTCA 1054 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | ||||| || || || ||||| |||||||||||||| Sbjct 1053 ACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 >seq10174 Length=1708 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| |||||||| ||||| || ||||| || ||| | || ||| || Sbjct 1058 CACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTC 1117 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 ||||| || || || | || | || ||||||||||| || || || || || ||||| Sbjct 1118 TAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 1177 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||||||| || | || | | ||| |||| || || || || || | || || Sbjct 1178 AATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTT 1237 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATCGCG 45344 |||||| |||||||| |||||||| |||||| || Sbjct 1238 GCCGGTGAGAGTTTTGACAAAAATCTGCATCACG 1271 >seq210 Length=64943 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188 ||| | ||| || || || |||||||| ||||| || ||| ||| | | || ||| Sbjct 39691 CACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCG--GACAGAGTGCGACCATCT 39634 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 ||||| || || || || ||||||| || ||||||||||| |||||||| || || ||| Sbjct 39633 TCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 39574 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 || ||||| || | |||| | ||| | ||| || || | |||| ||| Sbjct 39573 TGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTC 39514 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || || ||||| |||||||| Sbjct 39513 TTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188 ||| |||||||| ||||| |||||||| || || || || ||| | | || ||| Sbjct 30389 CACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCA--GACAGAGTGCGACCATCT 30446 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 |||| || || || || ||||||| || ||||||||||| |||||||| || || ||| Sbjct 30447 TCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 30506 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||| || || | |||| | ||| | ||| || || | |||| || Sbjct 30507 TGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTC 30566 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| |||||||| Sbjct 30567 TTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451833184646360