Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 138 1e-27
seq10174 98.7 9e-16
seq210 93.3 4e-14
>seq2251
Length=6394
Score = 138 bits (152), Expect = 1e-27
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171
||||||| || || ||||| || ||||| ||||| ||||||||||| || || || |||
Sbjct 1232 TTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 1173
Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| ||| ||| ||||| || || || || | || | |||||||||||| || |
Sbjct 1172 AGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 1113
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
| ||||| || || ||||||||||| ||||| || | || | | |||| || |||
Sbjct 1112 GTATGCCCTCCTTGTCTTGAATTTTCGCTTTGA-CGTTCTCAATAGAGTCGCTAGGCTCA 1054
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||||| || || || ||||| ||||||||||||||
Sbjct 1053 ACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004
>seq10174
Length=1708
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| ||||| |||||||| ||||| || ||||| || ||| | || ||| ||
Sbjct 1058 CACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTC 1117
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
||||| || || || | || | || ||||||||||| || || || || || |||||
Sbjct 1118 TAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 1177
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
||||||| || | || | | ||| |||| || || || || || | || ||
Sbjct 1178 AATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTT 1237
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATCGCG 45344
|||||| |||||||| |||||||| |||||| ||
Sbjct 1238 GCCGGTGAGAGTTTTGACAAAAATCTGCATCACG 1271
>seq210
Length=64943
Score = 93.3 bits (102), Expect = 4e-14
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188
||| | ||| || || || |||||||| ||||| || ||| ||| | | || |||
Sbjct 39691 CACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCG--GACAGAGTGCGACCATCT 39634
Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248
||||| || || || || ||||||| || ||||||||||| |||||||| || || |||
Sbjct 39633 TCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 39574
Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
|| ||||| || | |||| | ||| | ||| || || | |||| |||
Sbjct 39573 TGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTC 39514
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || || || ||||| ||||||||
Sbjct 39513 TTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188
||| |||||||| ||||| |||||||| || || || || ||| | | || |||
Sbjct 30389 CACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCA--GACAGAGTGCGACCATCT 30446
Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248
|||| || || || || ||||||| || ||||||||||| |||||||| || || |||
Sbjct 30447 TCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 30506
Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
||||| || || | |||| | ||| | ||| || || | |||| ||
Sbjct 30507 TGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTC 30566
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || ||||| ||||||||
Sbjct 30567 TTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451833184646360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |