Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4951 118 1e-21 >seq4951 Length=3275 Score = 118 bits (130), Expect = 1e-21 Identities = 174/243 (72%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 117046 CACTTT--GAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCAC 117103 |||||| ||||| | || |||| |||| || |||| || || ||||| |||| Sbjct 2201 CACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCCTCGATACTGTCAT 2260 Query 117104 CCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGA 117163 |||| | | || | |||||||| ||||| |||| | || || |||||||| |||| Sbjct 2261 CCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTCCCAGCGTTAAAGA 2320 Query 117164 GGGTTGGTGTCGCGTGGATGAACATACCTTGG-GACATCTTATCGTAGGTCTCCAAGACA 117222 | ||||||| || || || ||| || || ||||| || ||| ||||| | | || Sbjct 2321 GCGTTGGTGAGGCATGAATCAACC-ACTTTCCAGACATTAGATTGTACGTCTCAATGGCA 2379 Query 117223 GAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTT 117282 | | |||||| ||||||||||| || |||||||||||||||||||| || ||| | Sbjct 2380 GCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATGTACTGAGGTCTC 2439 Query 117283 TCC 117285 ||| Sbjct 2440 TCC 2442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613276436935560