Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4589 178 1e-39 seq210 123 2e-23 seq2251 120 3e-22 seq30086 100 3e-16 >seq4589 Length=3505 Score = 178 bits (196), Expect = 1e-39 Identities = 396/589 (67%), Gaps = 4/589 (1%) Strand=Plus/Plus Query 132880 TGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCG 132939 |||||||| || | || ||||||||| || | ||| || || | || || ||| Sbjct 2367 TGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCG 2426 Query 132940 TTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAA 132999 || ||||| || | || |||||||| || || || ||||||||||| || | || || Sbjct 2427 TTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAAC 2486 Query 133000 CTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACG-T 133058 || || ||||| || ||||| | || ||||||||||||| ||||| || ||| | Sbjct 2487 GAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGAT 2546 Query 133059 GGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCAT 133118 | | || || | |||||||| || ||||| || ||||| | |||||| |||| Sbjct 2547 GCCCTC-TTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAG 2605 Query 133119 CGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGAT 133178 ||||| |||||||| || ||| |||| ||| | || || || ||||| Sbjct 2606 CGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGAT 2665 Query 133179 GAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCA 133238 || ||||||||||| || || | |||||| | ||| | ||| | || ||||| || Sbjct 2666 CAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACA 2725 Query 133239 CCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGAT 133298 || ||||| || || ||||| | | ||| | | | ||||||||| ||||| Sbjct 2726 ACGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGAT 2785 Query 133299 GCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT 133358 ||| || || || || || |||||||| || | | || || || || || || || Sbjct 2786 GCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATT 2845 Query 133359 CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGA 133418 | ||||| ||| ||||| | | || |||||||| || |||||||| || Sbjct 2846 GAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGA 2905 Query 133419 CGCCTCGGCTTTTTTGTACATACT-CCACATGTCCGAATATTGTATGGG 133466 || | ||||| || || | ||| ||| ||||| ||||||||| || Sbjct 2906 AGCGACAGCTTTCTTATAGA-ACTCCCAAATGTCATGATATTGTATTGG 2953 >seq210 Length=64943 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || ||||| || || ||| | || || ||| | | Sbjct 42172 ATGCAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGAGCCGAGT 42231 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | || | || || | ||||| ||||| ||||| | |||||| Sbjct 42232 GATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAA 42291 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || || |||||| |||| |||| ||||| || ||||||||| Sbjct 42292 CAACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAAC 42351 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || |||||||| | || || |||||||||||||||||| |||| ||| Sbjct 42352 ATTCAAAAGGAGTCAACCCTTCATTTGGTGCTGCGTTTGCGAGGTGGC 42399 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || ||||| || ||||| || || ||| | || || ||| | | Sbjct 39482 ATGCAAATATTTGTGAAGACGCTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39541 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | || | ||||||| ||||| ||||| ||||| | ||||| Sbjct 39542 GACTCGATAGAGAATGTGAAGGCGAAAATCCAAGACAAGGAGGGCATTCCACCGGACCAG 39601 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||||| || ||| |||| || | ||||| || ||||||||| Sbjct 39602 CAGCGTTTGATATTTGCGGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39661 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || |||||||| |||| || ||||||||||| || Sbjct 39662 ATACAAAAGGAGTCGACTCTTCATTTGGTGCTCCG 39696 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || ||| | || ||||| || || ||| | || || ||| | | Sbjct 30826 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 30767 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 30766 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 30707 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || ||| |||| || | |||||| | |||||||| Sbjct 30706 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 30647 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || |||||||| |||| ||||||||||||| || Sbjct 30646 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCG 30612 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || ||| | || ||||| || || ||| | || || ||| | | Sbjct 39938 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39997 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 39998 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 40057 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || ||| |||| || | |||||| | |||||||| Sbjct 40058 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 40117 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || |||||||| |||| ||||||||||||| || Sbjct 40118 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCG 40152 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || ||||| ||||| || || || ||| | || || ||| | | Sbjct 30598 ATGCAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGAGCCGAGT 30539 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | || | || || | ||||| ||||| ||||| | ||||| Sbjct 30538 GACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAG 30479 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||||| || |||||||| || | ||||| || ||||||||| Sbjct 30478 CAGCGTTTGATATTTGCGGGTAAGCAGCTGGAAGATGGTCGCACTCTGTCTGACTACAAC 30419 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || |||||||| | || |||||| | ||||| ||| | | ||||| Sbjct 30418 ATTCAAAAGGAGTCAACTCTGCATCTTGTGCTTCGTCTTCGTGGCGG 30372 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || ||||| || ||||| || || || | || || ||| ||| Sbjct 39710 ATGCAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGAGCCCAGT 39769 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCA 38362 || | | | | | || | || || | ||||| ||||| || ||||||| | || Sbjct 39770 GATTCCATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCAT-CCCGCCGGATCA 39828 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 39829 GCAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAA 39888 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || ||||||||| |||| || ||||||||||| || Sbjct 39889 TATACAAAAGGAATCGACCCTTCATTTGGTGCTTCG 39924 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||||| ||||| || || || || | || || ||| ||| Sbjct 31054 ATGCAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGAGCCCAGT 30995 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCA 38362 || | | | | | || | || || | ||||| ||||| || ||||||| | || Sbjct 30994 GATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCAT-CCCGCCGGATCA 30936 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 30935 GCAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAA 30876 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || ||||||||| |||| || ||||||||||| || Sbjct 30875 TATACAAAAGGAATCGACCCTTCATTTGGTGCTTCG 30840 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || |||||| | |||||||| || || || | || || ||| | | Sbjct 39254 ATGCAAATCTTTGTGAAAACGTTGACGGGCAAGACTATTACATTGGAGGTGGAGCCAAGT 39313 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | || || | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 39314 GACTCGATTGAGAATG-TGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCA 39372 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || || || ||| |||| || | || || || |||||||| Sbjct 39373 ACAGCGTTTGATCTTTGCAGGAAAGCAGTTGGAAGATGGTCGTACTCTGTCTGACTACAA 39432 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| ||||| || | || ||||||||||||| || Sbjct 39433 CATTCAAAAAGAGTCAACTTTGCATTTGGTGCTTCG 39468 >seq2251 Length=6394 Score = 120 bits (132), Expect = 3e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| || || ||||| || || || ||||||||||| | || || ||| | Sbjct 1001 AAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCT 1060 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | |||| | |||| ||||| | ||||| ||||| || || | || Sbjct 1061 AGCGACTCTATTGAGAACG-TCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || || || || | || ||||| ||| |||| || | ||| || ||| |||||| Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCAT 38447 |||||| ||||||||| ||||||| ||| Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCAT 1207 >seq30086 Length=500 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || ||| | || ||||| || || ||| | || || ||| | | Sbjct 356 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 297 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 296 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 237 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || ||| |||| || | |||||| | |||||||| Sbjct 236 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 177 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || |||||||| |||| ||||||||||||| || Sbjct 176 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCG 142 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 ||||| ||||| || ||||||| | || ||||| | || | ||| || || ||| |||| Sbjct 491 GACAAGGAGGGCAT-CCCGCCGGATCAGCAGCGTTTAATCTTCGCCGGTAAGCAGTTGGA 433 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || | ||||| || ||||||||| || ||||||||| |||| || ||||||||||| Sbjct 432 AGATGGTCGCACTCTGTCCGACTACAATATACAAAAGGAATCGACCCTTCATTTGGTGCT 373 Query 38456 GCG 38458 || Sbjct 372 TCG 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499984666253440