Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq75 136 2e-26 seq56 118 4e-21 seq10174 105 3e-17 seq210 95.1 5e-14 seq1162 86.0 2e-11 seq2251 84.2 9e-11 >seq75 Length=122079 Score = 136 bits (150), Expect = 2e-26 Identities = 444/684 (65%), Gaps = 13/684 (2%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| |||||| | || || || ||||| || || || || | || | || || || | Sbjct 119004 TTGGTATTGATTTAGGGACGACGTTTTCCTGCGTTGGCGTGTTTCAGCACGGCAAGGTGG 118945 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037 ||||||| || || ||||| || || ||||| || | || |||||||||| Sbjct 118944 AAATTATCGCTAACGACCAGGGCAATCGTACTACACCGAGTTATGTTGCTTTTACGGATA 118885 Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAACACA 451096 | || | || | || | ||||| || | | | | | | || | ||| ||||| Sbjct 118884 CGGAGCGTCTCATTGGCGATGCTGCCAAGAACCAGGTTGCCATGAA-TCCCAGCAACACT 118826 Query 451097 GTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAG 451156 |||| |||||| || || || ||||| ||| | ||||| | |||| ||| || Sbjct 118825 GTATTTGATGCAAAGCGCTTGATTGGACGTCGCTTCGATGACAAGGCTGTGCAAGGCGAT 118766 Query 451157 A--AAAAATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGT 451212 | ||| ||| | |||| | || | ||| || ||||| | ||| |||| Sbjct 118765 ATGAAACATTGGCCTTTCAAA----GTGATCAATTCGGGCGGCAAGCCGAAGATTGAAGT 118710 Query 451213 AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTAC 451272 | || ||||| || || || | | |||||||| ||||||||||| || | Sbjct 118709 GGAGTACCGTGGTGAGACGAAGCAGTTCAGTGCGGAAGAAATATCATCTATGGTGCTGAT 118650 Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332 || ||||| || || ||||| ||| | ||| | || |||||||| |||||||| Sbjct 118649 GAAGATGAAGGAGACCGCAGAGGCGTATCTGGGTAAGCAGGTGACTGATGCGGTAATTAC 118590 Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392 || || ||||| ||||| || || || || ||||| || ||||| ||| || | Sbjct 118589 GGTACCGGCTTACTTCAACGACAGTCAGCGTCAGGCAACGAAGGATGCTGGAACGATATC 118530 Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 || | || || || || ||||| |||||||| ||||||||||| | || || || | Sbjct 118529 AGGAATGAACGTGCTGCGTATTATCAATGAACCGACAGCAGCTGCCATCGCCTACGGTTT 118470 Query 451453 AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC 451512 || || || | | | || || | | | |||||||| || || ||||| Sbjct 118469 AGACAA---GAAGGTAGGCAAGGAGCGCAACGTGCTCATTTTTGATTTGGGCGGCGGAAC 118413 Query 451513 TCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGG 451572 ||| ||| | || |||||||| ||||| ||||||| || ||| |||| || Sbjct 118412 CTTCGATGTGTCTATCCTGTCAATTGAGGATGGCATATTTGAGGTGAAGTCAACTGCCGG 118353 Query 451573 TGATACTCATCTAGGAGGTGAAGA 451596 ||| || ||||| || ||||| || Sbjct 118352 TGACACGCATCTTGGCGGTGAGGA 118329 >seq56 Length=142406 Score = 118 bits (130), Expect = 4e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||| | |||| || || ||||||||||| |||||||||||| | || || || || || Sbjct 120291 GTTAATAATGCGGTCATCACTGTTCCCGCGTATTTCAATGATTCCCAGCGTCAGGCCACC 120232 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || || |||||||| |||||||||||||| | || ||||| || || || Sbjct 120231 AAGGACGCTGGTCAAATTGCTGGGTTAAATGTTCTTCGTGTCATAAATGAGCCAACTGCG 120172 Query 451433 GCTGCTCTAGCATATGGACT 451452 |||||||| || ||||| || Sbjct 120171 GCTGCTCTTGCTTATGGCCT 120152 >seq10174 Length=1708 Score = 105 bits (116), Expect = 3e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || || || || || || ||||| |||||| | ||| Sbjct 1267 ATGCAGATTTTTGTCAAAACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAACCTTCT 1208 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || ||||| | | || |||||||||||| ||||| || || ||||| || || Sbjct 1207 GACTCTATTGAGAATGTGAAGGCAAAAATTCAAGACAAGGAGGGTATCCCTCCGGACCAG 1148 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | ||||| | || || ||| | |||||||| | | ||| | || || ||| Sbjct 1147 CAGCGTCTTATTTTTGCTGGCAAGCAATTAGAAGATGGGCGGTCCTTGTCCGACTACAAT 1088 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| |||| ||||| Sbjct 1087 ATTCAGAAGGAGTCAACGCTTCA 1065 >seq210 Length=64943 Score = 95.1 bits (104), Expect = 5e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || || || || || || || || || ||||||||||| || ||||| | Sbjct 31057 ATCATGCAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGAGCCC 30998 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 |||| |||||| | | || || |||||||| ||||| || || || || ||| Sbjct 30997 AGTGATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATCCCGCCGGAT 30938 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || |||||||| ||| | || || || | |||||||| | ||| || | || || Sbjct 30937 CAGCAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTAC 30878 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258 ||||| | ||||| | || ||||| || || Sbjct 30877 AATATACAAAAGGAATCGACCCTTCATTTGGT 30846 >seq1162 Length=12395 Score = 86.0 bits (94), Expect = 2e-11 Identities = 110/148 (74%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATG-ATGCACAACGGCAAGCAAC 451371 || || || ||||| || || || || || || ||||||| | || ||||| || | || Sbjct 9855 GTGACAGACGCAGTCATCACAGTGCCAGCCTACTTCAATGTAAGC-CAACGTCAGTCTAC 9797 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 | ||||||||||| | || ||| ||||||| || ||||||| || ||||| ||||| Sbjct 9796 GATCGATGCAGGACAGCTGGCGGGTCTAAATGTGCTGCGAATTACCAACGAACCGACAGC 9737 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAA 451459 |||||| | || || || || |||||| Sbjct 9736 AGCTGCCATCGCCTACGG-CTTGGAAAA 9710 >seq2251 Length=6394 Score = 84.2 bits (92), Expect = 9e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 391046 TATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATC 391105 || |||| | ||||| |||||||| || ||||| ||||| || |||||||| ||||| | Sbjct 1000 TAAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCC 1059 Query 391106 ATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165 || ||||| | ||| ||||||||||| ||||| || || || || || Sbjct 1060 TAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119 Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTA 391225 || ||||| | || || | || || || | || ||||| ||||| | | || || Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179 Query 391226 TAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || ||| | ||||| | || || || | || || ||||| ||||| Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGA 1228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974956679675828