Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq75 242 3e-58 seq966 156 3e-32 seq8839 109 4e-18 >seq75 Length=122079 Score = 242 bits (268), Expect = 3e-58 Identities = 944/1463 (65%), Gaps = 27/1463 (2%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || |||||||| ||||| || || | ||| || || |||||||| ||||| || || | Sbjct 117558 ACGTTAAGAATGCCATTAGCGTCAATATCGAAGGTCACTTCAATCTGAGGAACACCGCGA 117617 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 |||| || || || || ||| | || | ||||| || || ||| || | Sbjct 117618 GGAGCTGGAGGAATACCAGACAACTCGAACTTGCCCAGCAAGTTGTTGTCTCGTGTCATC 117677 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 || ||||||||| | | ||||| || | | |||||||| || || || || Sbjct 117678 GCACGCTCACCCTCGTACACCTGGATCAATACACCCGGCTGATTATCCGAGTAGGTGGTG 117737 Query 517445 AATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 || |||| | | || | ||||| || || || | | ||| | ||||| | Sbjct 117738 AAGG-TCTGCGTCTGTTTCGTTGGAATCGTCGTATTACGTTTAATCAGTGCAGTCATTAC 117796 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||||||||| || || | ||| || || ||||| | ||||| | || | | || || Sbjct 117797 ACCACCTGCCGTCTCCAGACCCAGTGACAGAGGCGCCACATCCAGCAGCAACAGATCCTG 117856 Query 517564 AAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 | || | | || | ||| | ||| ||||| || | ||| |||||||| |||| Sbjct 117857 CACCGCCTC-TGATTTGTCGCCACTCAAAATGGCTGCCTGCACAGCCGCACCATAGGCAA 117915 Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGA 517681 |||| || || || || | || | || | | |||||||||||| | ||| | | Sbjct 117916 CAGCCTCGTCTGGGTTTATAGACTTGTTCAACTCGCGACCATTGAAAAAGTCTTGTAGCA 117975 Query 517682 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 517741 | || | | ||||| |||||||| | ||| ||||| ||||| || || ||||| || Sbjct 117976 ACTTCTGT-ACCTTTGGAATACGTGTTGAACCTCCCACTAACACTATATCATGAACGGCA 118034 Query 517742 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT-CTAAA 517800 | ||||||| |||| ||| ||| | || || || || || || | ||| | || Sbjct 118035 GCCTTATCCAACTTTGCATCACGTAACGCCTTCTCCACTGGATCCAG-CGTGCTGCGGAA 118093 Query 517801 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATT 517858 | ||||| || || || || || || | || || ||| | || || |||||| Sbjct 118094 GAGGTCTGCGCACAGCTCCTCAAAACGCGCCCGCGT--GATCGACGTGTAGAAGTCAATT 118151 Query 517859 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG---TCGAAGAAGATAGTGCACGT 517915 ||||| | ||| || || | ||||| | | |||| |||| || || | | | Sbjct 118152 CCTTCCATCAACGAGTCGATCTCAATATTCGCCTGAGCACTCGAGCTCAAT-GTTCTCTT 118210 Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC--TTTTGCT-GATTGATTCAAA 517972 | || | ||||| ||||| | || | || | ||| | ||| | || | ||||| Sbjct 118211 T--GCTCTCTCACAGGCTGTACGCAGACGACGAATGGCCCTCTTGTTCGA---AGTCAAA 118265 Query 517973 TCTGT---TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029 || | ||| | || | ||| || || || ||| | | || |||||| || Sbjct 118266 TCCTTCCCTTTGTGCTTCCGCTTAAACTCCTCCACAAAGTGACTGACCAGACGAGAGTCG 118325 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 || || ||||| || | | || | || | || | | || | || | ||||| Sbjct 118326 AAGTCCTCACCGCCAAGATGCGTGTCACCGGCAGTTGACTTCACCTCAAATATGCCATCC 118385 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| |||| | || ||||| |||||| || |||| ||||||||| || || || Sbjct 118386 TCAATTGACAGGATAGACACATCGAAGGTTCCGCCGCCCAAATCAAAAATGAGCACGTTG 118445 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 || ||| || || || || | ||| || || | ||||| || || |||||||| Sbjct 118446 CGCTCCTTGCCTACCTTCTTGTCTAAACCGTAGGCGATGGCAGCTGCTGTCGGTTCATTG 118505 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 ||||| | || || || | || | || |||| ||||| || || || || | || Sbjct 118506 ATAATACGCAGCACGTTCATTCCTGATATCGTTCCAGCATCCTTCGTTGCCTGACGCTGA 118565 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 ||||| || || || || || ||||| || |||||||| || | ||||| | ||| Sbjct 118566 CTGTCGTTGAAGTAAGCCGGTACCGTAATTACCGCATCAGTCACCTGCTTACCCAGATAC 118625 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389 || ||| || | ||||| || | | | ||| ||||| |||| ||| | | Sbjct 118626 GCCTCTGCGGTCTCCTTCATCTTCATCAGCACCATAGATGATATTTCTTCCGCACTGAAC 118685 Query 518390 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 518449 ||||| | ||| | || ||||||| | || || || ||| || ||| Sbjct 118686 TGCTTCGTCTCACCACGGTACTCCACTTCAATCTTCGGCTTGCCGCCCGAATTGATCACT 118745 Query 518450 TTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 518509 || || ||||| | ||||||||| ||| ||| | ||||| || | ||||| Sbjct 118746 TTGAAAGGCCAATGTTTCATATCGCCTTGCACAGCCTTGTCATCGAAGCGACGTCCAATC 118805 Query 518510 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCA 518569 || || ||||||||||| | ||| ||| | ||||| || ||| | || | ||||| ||| Sbjct 118806 AAGCGCTTTGCATCAAATACAGTGTTGCTGGGATTCATGGCAACCTGGTTCTTGGCAGCA 118865 Query 518570 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 518629 || ||||| ||| | || || || ||||| | |||||| || || || ||||| || Sbjct 118866 TCGCCAATGAGACGCTCCGTATCCGTAAAAGCAACATAACTCGGTGTAGTACGATTGCCC 118925 Query 518630 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTT 518689 || || || || |||||||| || || || | || | || || || || ||| || Sbjct 118926 TGGTCGTTAGCGATAATTTCCACCTTGCCGTGCTGAAACACGCCAACGCAGGAAAACGTC 118985 Query 518690 GTTCCTAAATCAATACCAATAGC 518712 || |||||||||||||||| ||| Sbjct 118986 GTCCCTAAATCAATACCAACAGC 119008 >seq966 Length=15216 Score = 156 bits (172), Expect = 3e-32 Identities = 390/586 (67%), Gaps = 10/586 (2%) Strand=Plus/Minus Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 |||||| | |||||| ||||||||| || | ||||| | ||| | |||| |||| | Sbjct 1672 CAAAAGGGAAACATCAAAGGTTCCACCGCCAAGGTCAAACACAAGAATATTCTTTTCCGT 1613 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 |||| |||| || | || || |||| || || || || || |||||||| |||| Sbjct 1612 ATCTT---TTTTGTCCAATCCGTAAGCAATCGCTGCGGCGGTAGGCTCATTAATGATTCG 1556 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 ||| ||| | | ||||| || || || ||||| || ||||| | ||| | || || Sbjct 1555 CAAGACAGTCAAGCCAGCTATAGCACCAGCGTCTTTGGTTGCTTGACGTTGGGCGTCATT 1496 Query 518278 AAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGC 518337 |||||| ||||| ||||| | ||| || | || ||||| | |||| ||| || || Sbjct 1495 AAAATAAGCAGGCACAGTGACAACAGCGTGTGTGACTTCAGTTCCAAGATAGGCTTCAGC 1436 Query 518338 CGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGA 518397 | | ||||||||||| | || ||| | |||| | || || | | ||| Sbjct 1435 AATCTCCTTCATTTTACTGAGAACCATAGCCGAAACCTCCTCAGGAGCGAACCCCTTCTC 1376 Query 518398 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 518457 || || | || | | || ||||| | || || |||||||| || Sbjct 1375 CTCGTTACCTACTTGCACCTGCATGTACGGTTTGCTGTTTTTGTTGATCACTTTAAAGGG 1316 Query 518458 CCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTT 518517 | ||| ||||| || ||| || ||| | | |||| | ||| || | ||||| Sbjct 1315 GTAACGTTTAATATCACTCTGCACATCTTTGTCGTCATAATCACGACCGATGAGACGTTT 1256 Query 518518 TGCATCAAAAATAGTATTGGTTGGATT--AATTGCAGCTTGATATTTGGCTGCATCTCCA 518575 |||||||| | |||||| | ||||| || | |||| |||| |||||| || || ||| Sbjct 1255 GGCATCAAACAAAGTATTCTTGGGATTCGAAGT-CAGC-TGATTTTTGGCAGCGTCACCA 1198 Query 518576 ATCAGATGTT--CTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632 || || ||| | ||| | | ||||| |||||| ||||||||| | ||||| ||||| Sbjct 1197 ATTAGCCGTTCCCCGTCACCAGAAAATGCAACATAAGATGGAGTTATTCGATTGCCTTGG 1138 Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 || || || || |||||||| ||||| | | ||||| |||| Sbjct 1137 TCGTTTGCGATGATTTCAACACGTCCATTCTTGAAAACACCAACAC 1092 >seq8839 Length=1967 Score = 109 bits (120), Expect = 4e-18 Identities = 441/691 (64%), Gaps = 8/691 (1%) Strand=Plus/Plus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 |||||| || || || ||||| | || | |||| ||| | | || | || | || Sbjct 1266 ATCAAAGTCCTCTCCACCCAAATGCGTGTCACCTGCCGTCGACTTCACCTCAAATATCCC 1325 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 ||| || | |||| || | |||||| || || ||||||| ||| || || || || Sbjct 1326 ATCCTCTATGGACAGAATGGACACATCAAATGTCCCCCCACCCAAATCGAAGATGAGCAC 1385 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || || | || || || || | |||||||| | || || || || || || Sbjct 1386 GTTGCGCTCCCTCTCCACCTTCTTGTCCAATCCATACGCTATCGCCGCCGCCGTCGGCTC 1445 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||| || || | || ||||| | ||| | || | || ||||| || || || || | Sbjct 1446 ATTGATGATGCGCAGCACATTCAAACCCGATATCGTACCCGCATCCTTCGTCGCCTGACG 1505 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC-TTCTTTACCAA 518324 || ||||| || || ||||| || || || || ||||| || || ||| | |||| Sbjct 1506 CTGACTGTCGTTGAAGTACGCAGGCACTGTGATCACTGCATCCGTCACCTTCCTCCCCAA 1565 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 ||| || ||||| | ||||| || | | ||| || || || | || | Sbjct 1566 -ATACGCCTCCGCCGTCTCCTTCATCTTCAACAGCACCATCGACGATATCTCCTCCGCAC 1624 Query 518385 AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 518444 | ||||| ||| |||| || || | | || || || |||| | Sbjct 1625 TGAACTGCTTCCTCTCACCACGATACTCCACCTCTATCTTCGGCTTCCCTCCCGCATTTA 1684 Query 518445 TAACTTTAAATGGCCAGTATTTCATATCTGATTGAACA---CTTTGGTCATTAAAATCTC 518501 | || || || ||||||| ||||| || || || || | |||| ||| | Sbjct 1685 TCACCTTGAACGGCCAGTGCTTCATGTCCTCCTGCACTGCCCTATCGTCA---AAACGAC 1741 Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATT 518561 ||||| | || || |||||||| | || ||||| || || || || | |||| | Sbjct 1742 GTCCAATCAGACGCTTCGCATCAAACACTGTGTTGGTGGGGTTCATGGCTACCTGATTCT 1801 Query 518562 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621 | || ||||| || |||||| | || || || || || | ||||| || || |||| Sbjct 1802 TCGCGGCATCGCCGATCAGACGCTCCGTATCCGTGAAGGCCACATAACTCGGCGTCGTGC 1861 Query 518622 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 518681 | || ||||||||||| || || || || || || || | ||| | ||||| ||||| Sbjct 1862 GGTTGCCTTGATCATTGGCGATTATCTCCACCTTGCCGTGTTGGAACACACCCACACATG 1921 Query 518682 TAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || || ||||| ||||||||||| | ||| Sbjct 1922 AGAACGTCGTTCCCAAATCAATACCCACAGC 1952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779329185460246