Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4589 118 1e-21 seq4951 98.7 1e-15 >seq4589 Length=3505 Score = 118 bits (130), Expect = 1e-21 Identities = 183/256 (71%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 102093 TTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 102152 ||| | ||||| ||||| | ||||| | ||||| ||||||||||| | |||||| Sbjct 2623 TTTAACGCCATTCAAACGCTGCCATGCGTCGCTAAGAAGGCGGATTGGGCACTTAAGTGG 2564 Query 102153 TTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGT 102212 | | | ||| | || | |||||||| | | || || || | |||||||| Sbjct 2563 ATCGCGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGT 2504 Query 102213 ATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCC 102271 | |||||||| ||||| || ||| |||||| ||||||||||||||| ||||||||||| Sbjct 2503 GTTTTCTTCTCCGGTTCGTT-TGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCC 2445 Query 102272 AGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| |||| |||||||| ||| ||| || || || || ||| || ||||| Sbjct 2444 TGGTCTTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGC 2385 Query 102332 G-GTGGAACTTTTCAA 102346 | || || ||||||| Sbjct 2384 GTGTCTAA-TTTTCAA 2370 >seq4951 Length=3275 Score = 98.7 bits (108), Expect = 1e-15 Identities = 173/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||||||||||| ||||||||| |||| ||||| || || ||||| | ||| ||| Sbjct 2435 CCTCAGTACATGTTTATGCGGGTCTCGATAGGTATTCACGGCGAAGACGTGGATGCTGCC 2376 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTA---TGTTCATCCACGCAACACCAACCCTC 111728 | ||||| ||| | ||||| ||| | ||| || || || ||||||| ||| Sbjct 2375 ATTGAGACGTACAATCTAATGTC---TGGAAAGTGGTTGATTCATGCCTCACCAACGCTC 2319 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 || |||||||| || || | | || ||||| || || || | | | | ||||| Sbjct 2318 TTTAACGCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAAGGAT 2259 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 || ||| | ||||| |||| ||| |||| | ||||||| ||||| || | || Sbjct 2258 GACAGTATCGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAGTGCG 2199 Query 111849 GGTGGTATCGG 111859 ||||| ||||| Sbjct 2198 GGTGGGATCGG 2188 Score = 87.8 bits (96), Expect = 2e-12 Identities = 167/243 (69%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || ||||| | || ||||| || | || ||||| || || || ||| ||| || Sbjct 2008 GGCACCAATGGGGAGTCGAATGGTCTTGTACCGATGCTGCGAGTCTTCAACAGCACTGCT 1949 Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAG 112016 || |||||| |||||| |||| ||| || || |||| ||||| |||||| Sbjct 1948 CGTTATGTAGACCAAGGTGGGAA---CAAACGACCTGGCGCCTTCGCTGTCTACCTTGAG 1892 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 |||||||| | ||| | || | || | || ||||| ||| || | ||||||| Sbjct 1891 CCATGGCATCCAGATGTACTGCAATTTGTGGAATTGCGGAAGAACACTGGCGCTGAGGAG 1832 Query 112077 GCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135 || ||| | ||||| ||| ||| || ||||| || ||||| ||||||||||| || Sbjct 1831 ATTCG-TGCAAGAGATCTTTTCCTCGCGCTTTGGATCCCCGATCTGTTCATGAAGAGGGT 1773 Query 112136 TGA 112138 ||| Sbjct 1772 TGA 1770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620508915505520