Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 98.7 1e-15
>seq4589
Length=3505
Score = 98.7 bits (108), Expect = 1e-15
Identities = 353/549 (64%), Gaps = 5/549 (1%)
Strand=Plus/Plus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
||||| |||||||| ||| ||| ||||| ||||||||| ||| ||||||||||| ||
Sbjct 2397 TGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGACCA 2456
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| |||||||| || | | ||| || || ||||| | ||||| | |
Sbjct 2457 CGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATAGCA 2516
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGT---CGAACCACTTGAGAGCC 119684
|||||||| | | ||||||||| | | | ||| | ||| |||||| || |||
Sbjct 2517 GCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAAGTGCC 2576
Query 119685 CAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTT 119744
|| | ||||| | | ||| || | ||||| ||||| | || | |
Sbjct 2577 CAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCACGC 2636
Query 119745 TCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCATT 119804
|| || ||||| | |||| |||| || || ||| || | ||| ||||| |
Sbjct 2637 TCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATGTTC 2696
Query 119805 TCATTGTGTGAC-TGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGC 119863
||| | | || || ||||||| | ||||| || | || ||| ||||||| |
Sbjct 2697 TCAACG-GCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTCGTTACA 2755
Query 119864 AAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGAT 119923
|||||| | | | |||||| ||| || ||||| | || ||||| || | |
Sbjct 2756 AAAATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGAAC 2815
Query 119924 GTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTCCAGTCGTCCATATCTTTAGA 119983
||| || || | ||||| ||| ||||| ||| ||| ||| | ||| || |
Sbjct 2816 ATACGAAATAAAGTGTCGTTCACCATCATTGAGATTTTCCCAATCGGTAAGATCCTTCGC 2875
Query 119984 CAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCCCAAAG 120043
|| || ||||| ||| | ||||| ||| || || ||||||| |||||||
Sbjct 2876 TAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCTTATAGAACTCCCAAAT 2935
Query 120044 TTCAGGATA 120052
||| ||||
Sbjct 2936 GTCATGATA 2944
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|| ||| | || | |||||||||||| || ||||| || ||||||||||| || ||||||
Sbjct 2033 TACTCAGCTACGCGCTTTTCGAAGAAGTTGGTCTTCCCTTCGAGTGAGATATTCTCCATA 2092
Query 119268 AAGTCAAAAGGATTTTTG 119285
|||||||||||||| |||
Sbjct 2093 AAGTCAAAAGGATTCTTG 2110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588754464039800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |