Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4589 98.7 1e-15 >seq4589 Length=3505 Score = 98.7 bits (108), Expect = 1e-15 Identities = 353/549 (64%), Gaps = 5/549 (1%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| |||||||| ||| ||| ||||| ||||||||| ||| ||||||||||| || Sbjct 2397 TGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGACCA 2456 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| |||||||| || | | ||| || || ||||| | ||||| | | Sbjct 2457 CGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATAGCA 2516 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGT---CGAACCACTTGAGAGCC 119684 |||||||| | | ||||||||| | | | ||| | ||| |||||| || ||| Sbjct 2517 GCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAAGTGCC 2576 Query 119685 CAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTT 119744 || | ||||| | | ||| || | ||||| ||||| | || | | Sbjct 2577 CAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCACGC 2636 Query 119745 TCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCATT 119804 || || ||||| | |||| |||| || || ||| || | ||| ||||| | Sbjct 2637 TCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATGTTC 2696 Query 119805 TCATTGTGTGAC-TGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGC 119863 ||| | | || || ||||||| | ||||| || | || ||| ||||||| | Sbjct 2697 TCAACG-GCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTCGTTACA 2755 Query 119864 AAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGAT 119923 |||||| | | | |||||| ||| || ||||| | || ||||| || | | Sbjct 2756 AAAATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGAAC 2815 Query 119924 GTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTCCAGTCGTCCATATCTTTAGA 119983 ||| || || | ||||| ||| ||||| ||| ||| ||| | ||| || | Sbjct 2816 ATACGAAATAAAGTGTCGTTCACCATCATTGAGATTTTCCCAATCGGTAAGATCCTTCGC 2875 Query 119984 CAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCCCAAAG 120043 || || ||||| ||| | ||||| ||| || || ||||||| ||||||| Sbjct 2876 TAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCTTATAGAACTCCCAAAT 2935 Query 120044 TTCAGGATA 120052 ||| |||| Sbjct 2936 GTCATGATA 2944 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || ||| | || | |||||||||||| || ||||| || ||||||||||| || |||||| Sbjct 2033 TACTCAGCTACGCGCTTTTCGAAGAAGTTGGTCTTCCCTTCGAGTGAGATATTCTCCATA 2092 Query 119268 AAGTCAAAAGGATTTTTG 119285 |||||||||||||| ||| Sbjct 2093 AAGTCAAAAGGATTCTTG 2110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588754464039800