Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 93.3 5e-14
seq4589 84.2 3e-11
seq1281 84.2 3e-11
>seq4951
Length=3275
Score = 93.3 bits (102), Expect = 5e-14
Identities = 174/251 (69%), Gaps = 5/251 (2%)
Strand=Plus/Plus
Query 107071 CCCAGCC-CACTTT--GAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127
|||| || |||||| ||||| | ||||||| | || || | || || || | |||
Sbjct 2193 CCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCCTCGAT 2252
Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187
||| ||||| | | || | ||||| || |||||||| | | || || |||||
Sbjct 2253 ACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTCCCAGC 2312
Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGTCGTATGTCT 107246
|| ||||| ||||||| || ||||| ||| || || ||||| | ||| ||||
Sbjct 2313 GTTAAAGAGCGTTGGTGAGGCATGAATCAACC-ACTTTCCAGACATTAGATTGTACGTCT 2371
Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATT 107306
| | | ||| ||| | |||||| ||||| || || || | || |||||||||||||| |
Sbjct 2372 CAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATGTACT 2431
Query 107307 GGGGTGTTTCC 107317
| ||| | |||
Sbjct 2432 GAGGTCTCTCC 2442
>seq4589
Length=3505
Score = 84.2 bits (92), Expect = 3e-11
Identities = 166/243 (68%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| || || ||||| || || || || || |||| || ||
Sbjct 2385 GCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCA 2444
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| |||||||| | |||| |||||| ||| || || ||||||||||| |
Sbjct 2445 GGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCA-AACGAACCGGAGAAGAAAAC 2503
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA 117452
|||||| | | || || || | | ||||| ||| | || ||| | | |
Sbjct 2504 ACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGAT 2563
Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512
||| || | |||||| | ||||||||| | | ||||| | ||||| ||||| | |||
Sbjct 2564 CCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAA 2623
Query 117513 TAA 117515
|||
Sbjct 2624 TAA 2626
>seq1281
Length=11230
Score = 84.2 bits (92), Expect = 3e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 169362 TTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGACC 169421
|| || || | |||||||||||||||| | ||||| ||||| || |||||| || |||
Sbjct 1934 TTACCTCGCAAAGGAAAGACGCCATAGCGGTCACGCCCAACCACCCCGAGACCGGCCACC 1875
Query 169422 GCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGATTGCGCC 169481
||||| | || || ||||| ||||| |||| || || ||||| | || | |
Sbjct 1874 GCAAGAGACTTGGCCGAATCTCCCTCAGTGAGGATAAGAGTACAATACTGGGAGTTCTTT 1815
Query 169482 GTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTTGG 169530
|| || || | ||| || || |||| ||| ||||| || | | |||||
Sbjct 1814 GTCCCTGCATCGTTGGCATCATCCAGCTTTGGAATCCCTTTTAATTTGG 1766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589758886096840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |