Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 172 1e-37
seq10174 150 4e-31
seq210 138 3e-27
seq30086 98.7 2e-15
>seq2251
Length=6394
Score = 172 bits (190), Expect = 1e-37
Identities = 170/220 (77%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||||||||| || || || || || |||||||| ||||| |||| ||||||| |
Sbjct 1221 AGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGC 1162
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| || | |||||| || || |||||||||||||| |||||||| || ||||| ||
Sbjct 1161 CCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGTATGCCCTCC 1102
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||||||||| |||||||||||||| | ||| | || || ||||| ||
Sbjct 1101 TTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACCTCAAGAGTG 1042
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
| || || || || | ||||| || || | ||||||||
Sbjct 1041 ATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTT 1002
>seq10174
Length=1708
Score = 150 bits (166), Expect = 4e-31
Identities = 161/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
||||| ||||| || ||||| || ||||||||||| |||| |||| | | |||||||||
Sbjct 1059 ACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAG-GACCGCCCATCTTC 1117
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
| ||||| || || || ||||| || || ||||| ||||| || || || ||||||||
Sbjct 1118 TAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 1177
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||||||| ||| || |||||||| | ||| ||| ||| || |||||||| | |||||
Sbjct 1178 AATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTT 1237
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | |||||| || || | |||||
Sbjct 1238 GCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267
>seq210
Length=64943
Score = 138 bits (152), Expect = 3e-27
Identities = 152/201 (76%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| |||||||||||||| ||||| || | ||||| | |||||||| | |||||| ||
Sbjct 39451 AGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTCCAACTGCTTTCC 39392
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
||| ||||| | || |||||||| || |||||||| || |||||||| || || |||
Sbjct 39391 TGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTT 39332
Query 195063 GACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
|| |||||||| | ||| |||| ||||| || | |||| ||||| || |||||
Sbjct 39331 CACATTCTCAATCGAGTC---ACTTGGCTCCACCTCCAATGTAATAGTCTTGCCCGTCAA 39275
Query 195120 AGTTTTTACGAACACTTGCAT 195140
||||| || || | ||||||
Sbjct 39274 CGTTTTCACAAAGATTTGCAT 39254
Score = 134 bits (148), Expect = 3e-26
Identities = 154/206 (75%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || ||||| |||||||| ||||| || | ||||| | || || || | |||
Sbjct 42374 TGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGACCGTCCTCCAACTGT 42315
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || ||||| || ||||||||||| || |||||||| || ||||| ||||| ||
Sbjct 42314 TTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGAATCTTC 42255
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114
||| || ||||| || | || ||| ||||| || ||||||| |||||| ||
Sbjct 42254 GCCTTCACATTCTCTATCGAATC---ACTCGGCTCCACCTCCAGGGTAATCGTCTTGCCA 42198
Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140
|| | |||||| ||||| | ||||||
Sbjct 42197 GTAAGAGTTTTGACGAAGATTTGCAT 42172
Score = 127 bits (140), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || ||||| ||||| |||||||| ||||| || | ||||| | ||||||||
Sbjct 30390 ACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCTTCC 30449
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || || || | || || ||||| || |||||||| || |||||||||
Sbjct 30450 AGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGA 30509
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || ||||| || | ||| ||| ||||| || | ||||| |||
Sbjct 30510 ATCTTCGCCTTCACATTCTCTATCGAGTC---ACTCGGCTCCACCTCCAAGGTAATAGTC 30566
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | || || || || | ||||||
Sbjct 30567 TTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598
Score = 120 bits (132), Expect = 7e-22
Identities = 151/206 (73%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || || || ||||| |||||||| |||| ||||| | |||||||| | ||||
Sbjct 30852 TGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGC 30911
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| |||||||| | || || || || || || ||||| || ||||||||||| ||
Sbjct 30912 TTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGAATCTTA 30971
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114
||| || |||||||||| || ||| || ||||| || |||| ||||| ||
Sbjct 30972 GCCTTTACATTCTCAATGGAATC---ACTGGGCTCAACTTCCAGAGTAATAGTCTTCCCC 31028
Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || || | ||||||
Sbjct 31029 GTTAGCGTCTTCACAAAGATTTGCAT 31054
Score = 120 bits (132), Expect = 7e-22
Identities = 151/206 (73%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || || || ||||| |||||||| |||| ||||| | |||||||| | ||||
Sbjct 39912 TGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGC 39853
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| |||||||| | || || || || || || ||||| || ||||||||||| ||
Sbjct 39852 TTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGAATCTTC 39793
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114
||| || |||||||||| || ||| ||||| || || |||| ||||| ||
Sbjct 39792 GCCTTCACATTCTCAATGGAATC---ACTGGGCTCCACCTCCAGTGTAATTGTCTTGCCA 39736
Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || || | ||||||
Sbjct 39735 GTTAGCGTCTTCACAAATATTTGCAT 39710
Score = 100 bits (110), Expect = 6e-16
Identities = 136/186 (73%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 194959 ATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCG 195017
|||||||| || | |||| || | |||||||| | ||||||||| |||||||| | ||
Sbjct 40347 ATATTGTAGTCAGACAAG-GTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACG 40289
Query 195018 TTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGT 195077
|| ||||| || |||||||| || ||||||||||| || ||| || ||||| || |
Sbjct 40288 CTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGA 40229
Query 195078 GTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| ||| ||||| || | ||||| ||||| || || | || || || || |
Sbjct 40228 GTC---ACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATAT 40172
Query 195135 TTGCAT 195140
||||||
Sbjct 40171 TTGCAT 40166
>seq30086
Length=500
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || || || ||||| |||||||| |||| ||||| | |||||||| | ||||
Sbjct 382 TGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGC 441
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||||| |||||||| | || || || || || || ||||| || ||||||||||| ||
Sbjct 442 TTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGAATCTT 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109053849423797
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |