Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2251 127 1e-24 seq210 111 1e-19 seq30086 84.2 1e-11 >seq2251 Length=6394 Score = 127 bits (140), Expect = 1e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 34750 CATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGT 34809 || ||||||| | | |||||||| | || | || ||| || |||||||| |||| Sbjct 1235 CACTTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGT 1176 Query 34810 CCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTT 34869 | || || |||| |||| |||| ||| || |||||||| || ||||||||||||||| Sbjct 1175 CGGAGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTG 1116 Query 34870 GCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCT 34929 | || | ||||||||||| ||| ||| ||||||| | || || || | | || Sbjct 1115 GTGGTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCT 1056 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||| || | || |||||||| || || || || || ||||| || ||||| || Sbjct 1055 CAACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq210 Length=64943 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| ||||| || || | || |||| |||||||| || || |||||| Sbjct 30408 TCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAAT 30467 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| | || | ||||||||||| ||||||| || || Sbjct 30468 ATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTC 30527 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 ||||||| |||| | ||| || || | ||| || || || ||||| || ||||||||| Sbjct 30528 TCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACA 30587 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 30588 AATATTTGCAT 30598 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | ||| | || ||||| |||| || || || |||||||| |||||||| Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || | || |||| |||||| || ||||| || || ||||| ||||| | || Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||||| || || ||||||| |||| | ||| || Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| || || || || || ||||| || || ||||| ||||| Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || ||| || || || || ||||| || || | || |||| ||| Sbjct 30846 ACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCC 30905 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || ||||| || |||| || ||||| || |||| | ||||||||||| | Sbjct 30906 AACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGA 30965 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || || || |||| || |||||| || | || || || | Sbjct 30966 ATCTTAGCCTTTAC--ATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCT 31023 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || |||||||||||||| ||||| Sbjct 31024 TCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 98.7 bits (108), Expect = 6e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34800 ATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGT 34859 || || ||||| || | | | ||| |||| |||| ||| || ||||| || |||| || Sbjct 40347 ATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGC 40288 Query 34860 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT 34919 |||||||| | || | ||||||||||| ||||||| || || ||||||| Sbjct 40287 TGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAG 40228 Query 34920 TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGC 34979 |||| | ||| || || | ||| || || || ||||| || ||||||||||| || ||| Sbjct 40227 TCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGC 40168 Query 34980 AT 34981 || Sbjct 40167 AT 40166 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| |||||||| ||||| || || | || |||| |||| ||| ||||| ||||| Sbjct 39444 TCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAG 39385 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || || ||||| | || | ||||||||||| |||||| || || || Sbjct 39384 ATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCAC--AT 39327 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || ||||| |||| | ||| || || | || || || || ||||| | || |||| Sbjct 39326 TCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTCTTGCCCGTCAACGTTTTCA 39267 Query 34969 CAAAGATCTGCAT 34981 ||||||| ||||| Sbjct 39266 CAAAGATTTGCAT 39254 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || ||| || || || || ||||| || || | || |||| ||| Sbjct 39918 ACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCC 39859 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || ||||| || |||| || ||||| || |||| | ||||||||||| | Sbjct 39858 AACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGA 39799 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 |||||| || || || || || || |||| || ||| || || | || || || | Sbjct 39798 ATCTTCGCCTTCAC--ATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCT 39741 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || ||||||||||| || ||||| Sbjct 39740 TGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || || || ||||| || | | | ||| |||| |||| ||| || ||||| || Sbjct 30636 TCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAG 30695 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 |||| || || ||||| | || | ||||||||||| |||||| || || Sbjct 30696 ATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTC 30755 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 ||||||| |||| | ||| || || | ||| || || || || || | ||||||||| Sbjct 30756 TCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACA 30815 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 30816 AATATTTGCAT 30826 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || || || || || || ||||| || || | || |||| ||| Sbjct 39690 ACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCC 39631 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || |||||||| | || |||||||| | || | ||||||||||| Sbjct 39630 AACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGG 39571 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || ||| || || ||||||| |||| | ||| || || | ||| || || || Sbjct 39570 ATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTG 39511 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||||||||| || ||||| Sbjct 39510 CCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || || || ||||| || | | | ||| |||| |||| ||| || ||||| || Sbjct 40128 TCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAG 40069 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 |||| || || ||||| | || | ||||||||||| |||||| || || Sbjct 40068 ATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTC 40009 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 ||||||| |||| | ||| || || | ||| || || || || || | ||||||||| Sbjct 40008 TCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACA 39949 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 39948 AATATTTGCAT 39938 >seq30086 Length=500 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || || || ||||| || | | | ||| |||| |||| ||| || ||||| || Sbjct 166 TCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAG 225 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 |||| || || ||||| | || | ||||||||||| |||||| || || Sbjct 226 ATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTC 285 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 ||||||| |||| | ||| || || | ||| || || || || || | ||||||||| Sbjct 286 TCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACA 345 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 346 AATATTTGCAT 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324514545801048