Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 257 2e-63
>seq4589
Length=3505
Score = 257 bits (284), Expect = 2e-63
Identities = 495/722 (69%), Gaps = 10/722 (1%)
Strand=Plus/Plus
Query 18831 ACAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATT 18890
||||||||| || || | | ||||||| |||||||| || ||||| |||||| |
Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311
Query 18891 TACTGCCTCTGATATAATAG-ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGT- 18948
|| ||||| | ||||| ||||| |||| ||| | |||| ||| || ||||
Sbjct 2312 GACGGCCTCCGTCATAATGTCATACA-CTCTTTCTGCTGTAGGTT--TATTGACAATGTG 2368
Query 18949 -TTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATT 19007
|| || || | ||| ||||| || || || || || || | ||| |||| || ||
Sbjct 2369 CTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTT 2428
Query 19008 AGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGA 19067
| || || | ||||||||| || || | || || | ||| || ||||||||||| ||
Sbjct 2429 ACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGA 2488
Query 19068 TCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGC 19127
|| || ||||| | ||| || | || || ||||| || | | || | || ||
Sbjct 2489 ACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGC 2548
Query 19128 ATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGT 19187
||||| ||||| || ||||||||||| |||||||| || ||||||| ||
Sbjct 2549 CCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGT 2608
Query 19188 CTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAA 19247
| || | ||||||| | | |||||| | | || || ||||||| ||| ||||
Sbjct 2609 TTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAG 2668
Query 19248 TAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCT 19307
| | |||||||| |||||||| || || | |||| || | ||| |||||||| |
Sbjct 2669 AAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACG 2728
Query 19308 TGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCC 19367
|| || | | || ||||| ||||||| | | |||||||| ||||| || ||
Sbjct 2729 AGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGATGCC 2788
Query 19368 ATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATC-TGAGGTTA 19426
|||||| |||||||| || || | |||| |||||| ||| |||| | | | ||
Sbjct 2789 ATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCA--TTG 2846
Query 19427 ATGTATT-CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAA 19485
| | || |||||| ||| ||| || | |||||| || || ||||| ||||||||||||
Sbjct 2847 AGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAA 2906
Query 19486 GCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAAT 19545
|| | ||||| ||||| | | ||| || ||| |||||||||| || | | ||||||
Sbjct 2907 GCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAAT 2966
Query 19546 CT 19547
||
Sbjct 2967 CT 2968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561897369801240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |