Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4589 257 2e-63 >seq4589 Length=3505 Score = 257 bits (284), Expect = 2e-63 Identities = 495/722 (69%), Gaps = 10/722 (1%) Strand=Plus/Plus Query 18831 ACAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATT 18890 ||||||||| || || | | ||||||| |||||||| || ||||| |||||| | Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311 Query 18891 TACTGCCTCTGATATAATAG-ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGT- 18948 || ||||| | ||||| ||||| |||| ||| | |||| ||| || |||| Sbjct 2312 GACGGCCTCCGTCATAATGTCATACA-CTCTTTCTGCTGTAGGTT--TATTGACAATGTG 2368 Query 18949 -TTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATT 19007 || || || | ||| ||||| || || || || || || | ||| |||| || || Sbjct 2369 CTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTT 2428 Query 19008 AGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGA 19067 | || || | ||||||||| || || | || || | ||| || ||||||||||| || Sbjct 2429 ACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGA 2488 Query 19068 TCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGC 19127 || || ||||| | ||| || | || || ||||| || | | || | || || Sbjct 2489 ACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGC 2548 Query 19128 ATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGT 19187 ||||| ||||| || ||||||||||| |||||||| || ||||||| || Sbjct 2549 CCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGT 2608 Query 19188 CTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAA 19247 | || | ||||||| | | |||||| | | || || ||||||| ||| |||| Sbjct 2609 TTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAG 2668 Query 19248 TAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCT 19307 | | |||||||| |||||||| || || | |||| || | ||| |||||||| | Sbjct 2669 AAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACG 2728 Query 19308 TGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCC 19367 || || | | || ||||| ||||||| | | |||||||| ||||| || || Sbjct 2729 AGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGATGCC 2788 Query 19368 ATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATC-TGAGGTTA 19426 |||||| |||||||| || || | |||| |||||| ||| |||| | | | || Sbjct 2789 ATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCA--TTG 2846 Query 19427 ATGTATT-CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAA 19485 | | || |||||| ||| ||| || | |||||| || || ||||| |||||||||||| Sbjct 2847 AGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAA 2906 Query 19486 GCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAAT 19545 || | ||||| ||||| | | ||| || ||| |||||||||| || | | |||||| Sbjct 2907 GCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAAT 2966 Query 19546 CT 19547 || Sbjct 2967 CT 2968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561897369801240