Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq75 163 2e-34 seq8839 125 6e-23 seq966 118 9e-21 seq56 107 2e-17 seq1162 105 5e-17 seq2251 102 7e-16 >seq75 Length=122079 Score = 163 bits (180), Expect = 2e-34 Identities = 359/535 (67%), Gaps = 20/535 (4%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| |||||||| || || | | || ||||| || | || | || || Sbjct 119009 AGCTGTTGGTATTGATTTAGGGACGACGTTTTCCTGCGTTGGCGTGTTTCAGCACGGCAA 118950 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || |||||||| || || || || || || | ||||| || ||||||| |||| || Sbjct 118949 GGTGGAAATTATCGCTAACGACCAGGGCAATCGTACTACACCGAGTTATGTTGCTTTTAC 118890 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTAC 550167 ||| || || | | | |||| ||||| || || | || | ||| || ||||| | Sbjct 118889 GGATACGGAGCGTCTCATTGGCGATGCTGCCAAGAACCAGGTTGCCA-TG--AATCCCAG 118833 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||| ||| | |||||||| || || || |||||| | | || |||| | |||| || Sbjct 118832 CAACACTGTATTTGATGCAAAGCGCTTGATTGGACGTCGCTTCGATGACAAGGCTGTGCA 118773 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 | |||||||| |||||||||||| || | | ||| || || || | ||||| Sbjct 118772 AGGCGATATGAAACATTGGCCTTTCAAAGTGATCAATTCGGGCGGCAAGCCGAAGATTGA 118713 Query 550288 AGCTACTCATGAAGGATC-TGTT------AAACAATTTTCACCAGAACAAATTTCATCTA 550340 || || || | | || | || || || | ||| |||| ||||||| Sbjct 118712 AG-------TGGAGTACCGTGGTGAGACGAAGCAGTTCAGTGCGGAAGAAATATCATCTA 118660 Query 550341 TGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400 |||| | ||||| ||||| | || || || | | | ||| | | || || |||| Sbjct 118659 TGGTGCTGATGAAGATGAAGGAGACCGCAGAGGCGTATCTGGGTAAGCAGGTGACTGATG 118600 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 | ||||| || ||||| || || || || ||| || ||||| || || || ||||||| Sbjct 118599 CGGTAATTACGGTACCGGCTTACTTCAACGACAGTCAGCGTCAGGCAACGAAGGATGCTG 118540 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 || || | ||| | || || || ||||||||||||||||| || || ||||| Sbjct 118539 GAACGATATCAGGAATGAACGTGCTGCGTATTATCAATGAACCGACAGCAGCTGC 118485 >seq8839 Length=1967 Score = 125 bits (138), Expect = 6e-23 Identities = 367/557 (66%), Gaps = 24/557 (4%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| ||||| ||||| || | ||||| ||||| | ||| | || || Sbjct 1952 GCTGTGGGTATTGATTTGGGAACGACGTTCTCATGTGTGGGTGTGTTCCAACACGGCAAG 1893 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || |||||||||||||| ||| | || || || |||||| | |||||| Sbjct 1892 GTGGAGATAATCGCCAATGATCAAGGCAACCGCACGACGCCGAGTTATGTGGCCTTCACG 1833 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168 || || || | | | | || ||||| || || |||| ||||| || || || ||| Sbjct 1832 GATACGGAGCGTCTGATCGGCGATGCCGCGAAGAATCAGGTAGCCA-TG--AACCCCACC 1776 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || | |||||||| || ||| | |||||| | ||||| | ||| | | || ||| Sbjct 1775 AACACAGTGTTTGATGCGAAGCGTCTGATTGGACGTCGTTTTGACGATAGGGCAGTGCAG 1716 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | || |||||||| ||||| ||| | | | |||| || || || ||| Sbjct 1715 GAGGACATGAAGCACTGGCCGTTCAAGGTGATAAATGCGGGAGGGAAGCC-------GAA 1663 Query 550289 GCTACTCATGAAGGATC-TGTT------AAACAATTTTCACCAGAACAAATTTCATCTAT 550341 | || || || ||| || | || || || | || | || || || || Sbjct 1662 GATAGAGGTGGAGTATCGTGGTGAGAGGAAGCAGTTCAGTGCGGAGGAGATATCGTCGAT 1603 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATG 550400 ||| | |||| ||||| | || || || | | |||| | ||| || ||||||| Sbjct 1602 GGTGCTGTTGAAGATGAAGGAGACGGCGGAGGCGTAT-TTGGGGAGGAAGGTGACGGATG 1544 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 |||| || || || || || || || || ||| || ||||| || || || ||||| | Sbjct 1543 CAGTGATCACAGTGCCTGCGTACTTCAACGACAGTCAGCGTCAGGCGACGAAGGATGCGG 1484 Query 550461 G-ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 | ||| || | || | ||||| || || || |||||||| || || || || || | Sbjct 1483 GTACG-ATATCGGGTTTGAATGTGCTGCGCATCATCAATGAGCCGACGGCGGCGGCGATA 1425 Query 550520 GCATATGGACTTGATAA 550536 || |||||| | || || Sbjct 1424 GCGTATGGATTGGACAA 1408 >seq966 Length=15216 Score = 118 bits (130), Expect = 9e-21 Identities = 307/463 (66%), Gaps = 10/463 (2%) Strand=Plus/Plus Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAAT-GTTAAGT 552173 |||| || || || |||||||| || ||||| || || ||||| | | | || ||| Sbjct 2037 ATGATATCGTTCTAGTTGGTGGGTCAACAAGGATACCCAAAATCCAACAGCTCGTGAAGG 2096 Query 552174 TCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTAT 552233 || || ||| || || | || | | | ||||||| ||||| ||||| || ||| Sbjct 2097 AGTTCTT-CAACGGCAAGGAGCCAAGTAGAGGCATTAATCCTGATGAAGCTGTCGCTTAT 2155 Query 552234 GGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAA-ACTACAAAATAT 552292 || || ||| | ||||| | | || || || || |||| | ||| | ||| Sbjct 2156 GGCGCTGCAGTGCAAGCCGGTGTTATTAGCGG------TGTTGAAGATACTGGTGA-TAT 2208 Query 552293 TGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGAC 552352 || || | |||||| || | | | ||| | || || || ||||| ||||||| Sbjct 2209 CGTGCTCCTTGATGTTTGCCCATTGACCATGGGTATTGAGACTGTGGGAGGCGTTATGAC 2268 Query 552353 TAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTA 552412 || ||||| || |||||| ||||| ||||| || | | || ||||| Sbjct 2269 CAAACTTATTCCCAGGAATACTGTCATTCCCACCAAAAAGTCGCAAATTTTCTCTACAGC 2328 Query 552413 TTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAA 552472 | | || ||||| | | ||||| ||||| | ||||| || || | | | ||||| Sbjct 2329 TGCTGACAATCAGCCAACCGTTACCATTCAGGTGTTTGAGGGTGAGCGTCCAATGACTAA 2388 Query 552473 AGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGT 552532 ||||||| || || |||| ||| || | ||| |||||||| ||||| ||||| | Sbjct 2389 AGATAATCATTTCCTGGGTAAGTTTGATCTGACAGGCATTCCTCCGGCTCCCCGTGGTTT 2448 Query 552533 ACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATT 552575 ||| ||||||||||| || ||||| || |||| ||||| ||| Sbjct 2449 ACCCCAAATTGAAGTCACCTTCGAGATTGATGTGAATGGTATT 2491 Score = 91.5 bits (100), Expect = 1e-12 Identities = 340/526 (65%), Gaps = 9/526 (2%) Strand=Plus/Plus Query 550018 ATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGG 550077 |||| | |||||||||||| | ||||| |||||||| || || || || ||||| Sbjct 1084 ATATTTTAGTGTTGGTGTTTTCAAGAATGGACGTGTTGAAATCATCGCAAACGACCAAGG 1143 Query 550078 TAACAGAACTACTCCATCTTATGTTTCTTTCAC-GGAAACTG--AACATTTAGTTGGTGA 550134 || ||| ||||||||||||||| | || | || || | ||| || ||||||| Sbjct 1144 CAATCGAATAACTCCATCTTATGTTGCATTTTCTGGTGACGGGGAACGGCTAATTGGTGA 1203 Query 550135 TGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTT 550194 || || ||| |||| ||| ||||| | |||||| | |||||||| |||||| | Sbjct 1204 CGCTGCCAAAAATCAGCTGACTTCGAATCCCAAGAATACTTTGTTTGATGCCAAACGTCT 1263 Query 550195 AATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCA 550254 || || | || | | || ||| ||| ||||| || | || || || | Sbjct 1264 CATCGGTCGTGATTATGACGACAAAGATGTGCAGAGTGATATTAAACGTTACCCCTTTAA 1323 Query 550255 AATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGG-ATCT--GTTAA 550311 | | | || | ||||| || || | || | | | | ||| | | | || Sbjct 1324 AGTGATCAACAAAAACAGCAAACCGTACAT-GCAGGTGC--AAGTAGGTAACGAGGAGAA 1380 Query 550312 ACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAG 550371 || | || || | |||| |||||||| | | |||||||| | | || Sbjct 1381 GGGGTTCGCTCCTGAGGAGGTTTCGGCTATGGTTCTCAGTAAAATGAAGGAGATTGCTGA 1440 Query 550372 TGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGA 550431 || | | |||| ||||| || | || || | ||||| || || ||||||||||| Sbjct 1441 AGCCTATCTTGGAACTGAAGTCACACACGCTGTTGTCACTGTGCCTGCTTATTTTAATGA 1500 Query 550432 CTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTAT 550491 | | ||||||||||| || ||||| ||||| ||| ||||| | | ||| | || || Sbjct 1501 CGCCCAACGTCAAGCAACCAAAGACGCTGGTGCTATAGCTGGCTTGACTGTCTTGCGAAT 1560 Query 550492 TATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || ||||| ||||| || || || |||| || ||| | || ||| Sbjct 1561 CATTAATGAGCCTACCGCCGCAGCGATTGCTTACGGATTGGACAAA 1606 >seq56 Length=142406 Score = 107 bits (118), Expect = 2e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| || || ||||| ||||| || || ||||| || || || || | Sbjct 120284 ATGCGGTCATCACTGTTCCCGCGTATTTCAATGATTCCCAGCGTCAGGCCACCAAGGACG 120225 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | |||||||| | |||||||||||| | || ||||| || ||||| ||||| | Sbjct 120224 CTGGTCAAATTGCTGGGTTAAATGTTCTTCGTGTCATAAATGAGCCAACTGCGGCTGCTC 120165 Query 550518 TTGCATATGGACTTGAT 550534 |||| ||||| || ||| Sbjct 120164 TTGCTTATGGCCTGGAT 120148 >seq1162 Length=12395 Score = 105 bits (116), Expect = 5e-17 Identities = 346/533 (65%), Gaps = 16/533 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || ||||| ||||| |||| | ||||||||||||| ||| | || | Sbjct 10255 AGCCATCGGCATTGATTTGGGAACAACATTTTCATGTGTTGGTGTTTTCCAAGACGGCAG 10196 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || || || ||||| || |||||| | | || || || |||||| | ||||| Sbjct 10195 AGTGGAGATCATCGCCAACGACCAAGGTTTCCGCACAACGCCGAGTTATGTGGCCTTCAC 10136 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| | || | | | ||| |||| |||||| | || ||| || | |||||| Sbjct 10135 GGACAAGGAGCGCCTCATCGGTAATGCCGCAAAAGACCAGGCCTTCTTCAACCTTACCAA 10076 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 |||| | | ||| | || ||| | || || | |||||| | || || |||| Sbjct 10075 TACTGTGTATGACTCAAAGCGTCTTATCGGGCGCAGTTTTGACGACAAAGAAGTGCAGGA 10016 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 || || || | |||||||||| | || ||| ||| ||| | || || | Sbjct 10015 CGACATAAAACGTTGGCCTTTCAAGGTTACAGGTGTGAATGGGGTACCGAAGATCGAGG- 9957 Query 550291 TACTCATGAAGGATC-TGTTAA---ACA---ATTTTCACCAGAACAAATTTCATCTATGG 550343 || | ||| || ||| ||| ||| |||| || || || |||||| Sbjct 9956 ------TGGAACATCTTGGTAAGCCACAGTCATTCGTTGCAGAGCAGATCTCGGCTATGG 9903 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTC-AAGAAGTTACGGATGCA 550402 | || ||| ||||| || || | ||| | | | |||| | || | || || || ||| Sbjct 9902 TGCTAGAGAAGATGAAGCAGAC-GGCAGAGGTGTATTTGGGCGAAAAGGTGACAGACGCA 9844 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || || || || ||||| || || |||| |||||||| |||| | ||||| ||| Sbjct 9843 GTCATCACAGTGCCAGCCTACTTCAATGTAAGCCAACGTCAGTCTACGATCGATGCAGGA 9784 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 | | || || || ||||| || || |||| ||| ||||| || || ||||| Sbjct 9783 CAGCTGGCGGGTCTAAATGTGCTGCGAATTACCAACGAACCGACAGCAGCTGC 9731 >seq2251 Length=6394 Score = 102 bits (112), Expect = 7e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 |||||||| || || ||| || ||| ||||| || | ||||||| ||| || Sbjct 1212 ACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGCCCATCCTCC 1153 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 | || || |||||||| ||||||| |||||| || || || || || || || |||||| Sbjct 1152 AACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGA 1093 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTA 563445 ||||| ||| || |||||| | || | | | || ||||| | ||||| Sbjct 1092 ATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACCTCAAGAGTGATGGTTTTC 1033 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||||| |||||||| ||||||||||| Sbjct 1032 CCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027704652209590