Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4589 226 3e-54 >seq4589 Length=3505 Score = 226 bits (250), Expect = 3e-54 Identities = 520/775 (67%), Gaps = 16/775 (2%) Strand=Plus/Plus Query 36996 TCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATA 37055 ||| | || |||| ||| |||||||| |||||| | ||||||||| | | || || Sbjct 2202 TCCGTAAGCAGCCGATCAGCAACAAACCTTATGTACTGACACATTAGGCGACAATTCATG 2261 Query 37056 CCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCT 37115 || || || | || || | |||||| || ||| |||||| | || || || Sbjct 2262 CCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCTGACGGCCTCC 2321 Query 37116 TTAACTATATTA-ACAATAACTTCTTCAGTTGGGGGATATTTTAAATAT--TTAAACAAT 37172 | | || | | ||| | |||| | || || |||| ||| | || || | | Sbjct 2322 GTCATAATGTCATACACTCT-TTCTGCTGTAGGTT--TATTGACAATGTGCTTGAAAATT 2378 Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 | ||| ||||| || || | |||||||| | ||| |||| || ||| ||||| Sbjct 2379 AGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTA 2438 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 | || ||||| | ||| | || || | |||||| || | ||||| || || || ||| Sbjct 2439 AGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAG 2498 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352 |||| ||| |||| || || || || || | ||| | || | | || || | || Sbjct 2499 AAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTC 2558 Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTA---ACACATTCAATTGTTTCAATT 37409 | ||||| || || |||||| ||||| ||| || ||| | |||| ||| Sbjct 2559 GCGATCCACTTAAGTGCCCAATCCGCCTTC---TTAGCGACGCATGGCAGCGTTTGAATG 2615 Query 37410 GCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTA 37469 || || || | ||| | ||| | || | | ||| ||||| || || | | | Sbjct 2616 GCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAA 2675 Query 37470 TACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCA 37529 ||||||||||| ||||| || |||| || | || | ||||||||||| | ||| ||| Sbjct 2676 TACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTCA 2735 Query 37530 GATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTA 37589 | | |||||| |||||| |||| || | ||| ||||| ||||| || |||||||| Sbjct 2736 GGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTC 2795 Query 37590 GCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAATTTTT 37647 ||||||||||| || |||||||| ||||| |||| |||| ||| |||| | |||| Sbjct 2796 GCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAGA--TTTT 2853 Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATG 37707 |||||| ||| ||| || | ||||||||| || ||||| ||||||||| || | | Sbjct 2854 CCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAG 2913 Query 37708 CACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762 | ||||| | | |||||| |||| || ||||||||| | | |||||||| Sbjct 2914 CTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATCT 2968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592094007439640