Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq210 140 2e-28 seq30086 114 1e-20 seq2251 104 2e-17 seq10174 91.5 1e-13 >seq210 Length=64943 Score = 140 bits (154), Expect = 2e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| | || |||||||||||| ||||| ||||| ||| | ||| Sbjct 39471 AGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGA 39412 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || ||||| |||| |||||||| |||| |||| ||||||| Sbjct 39411 CCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCC 39352 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || | ||||||||||| ||| Sbjct 39351 TTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTA 39292 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || |||||||| ||||| ||||| || |||||| || Sbjct 39291 ATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCATCCTG 39250 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| ||||||||| || || ||| |||||||| ||||| || || ||| | ||| || Sbjct 42386 CGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGACCG 42327 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || |||||||| ||||| ||||| || || || ||||| |||| |||| |||||||||| Sbjct 42326 TCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCTTG 42267 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||| || ||| | | || || || ||||||||||| |||||| Sbjct 42266 TCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGGGTAATC 42207 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || || | |||||| || || || |||||| Sbjct 42206 GTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCATC 42171 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||| | ||| || || ||| |||||||| ||||| ||||| Sbjct 30372 CCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGAC 30431 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| | || |||| ||||||||| |||||||||| ||||| || |||| ||| Sbjct 30432 AGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGA 30491 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | || || || ||||||| Sbjct 30492 ATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACC 30551 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || ||||| | || || ||||| || ||||| Sbjct 30552 TCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || || ||| ||||| |||||||| || || ||| | ||| Sbjct 39699 AGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 39640 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||||||||||||| |||||||||| ||||| || |||| |||| ||||||| Sbjct 39639 CCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCC 39580 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || ||| | | || || | ||||||||||| ||| Sbjct 39579 TTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTA 39520 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || |||| || || ||||| || ||||| Sbjct 39519 ATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| | || ||| ||||| |||||||| ||||| | | || Sbjct 30609 AGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGT 30668 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||||||||| || || | |||||||| |||| |||| ||||||| Sbjct 30669 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCC 30728 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || | ||||||||||| ||| Sbjct 30729 TTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTA 30788 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || || ||||| || ||||| Sbjct 30789 ATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| | || ||| ||||| |||||||| ||||| | | || Sbjct 40155 AGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGT 40096 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||||||||| || || | |||||||| |||| |||| ||||||| Sbjct 40095 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCC 40036 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || | ||||||||||| ||| Sbjct 40035 TTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTA 39976 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || || ||||| || ||||| Sbjct 39975 ATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || || || ||||| |||||||| || || ||| | ||| Sbjct 30837 AGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 30896 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||||||||| || || | ||||| ||||||| || | ||||||| Sbjct 30897 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCC 30956 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | || || | ||| || |||| ||| Sbjct 30957 TTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTA 31016 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || ||||| || ||||| Sbjct 31017 ATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || || || ||||| |||||||| || || ||| | ||| Sbjct 39927 AGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 39868 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||||||||| || || | ||||| ||||||| || | ||||||| Sbjct 39867 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCC 39808 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | || || | ||||||||||| ||| Sbjct 39807 TTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTA 39748 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| || ||||| Sbjct 39747 ATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 95.1 bits (104), Expect = 9e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 48585 ATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGC 48644 |||||||| ||||| | | || | || ||||||||||||||||| || || | ||| Sbjct 40347 ATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGC 40288 Query 48645 TGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGAC 48704 || || |||| |||| |||||||||||| |||||| || ||| | | || Sbjct 40287 TGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAG 40228 Query 48705 TCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGC 48764 || || ||||||||||| ||||| || || ||||| | || || ||||| || ||| Sbjct 40227 TCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGC 40168 Query 48765 AT 48766 || Sbjct 40167 AT 40166 >seq30086 Length=500 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| | || ||| ||||| |||||||| ||||| | | || Sbjct 139 AGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGT 198 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||||||||| || || | |||||||| |||| |||| ||||||| Sbjct 199 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCC 258 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || | ||||||||||| ||| Sbjct 259 TTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTA 318 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || || ||||| || ||||| Sbjct 319 ATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || || || ||||| |||||||| || || ||| | ||| Sbjct 367 AGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 426 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||||||||| || || | ||||| ||||||| || | ||||||| Sbjct 427 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCC 486 Query 48669 TTGTCGCTAATCTT 48682 ||||| |||||| Sbjct 487 TTGTCTTGAATCTT 500 >seq2251 Length=6394 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| | ||| || | ||| ||||| || |||||||| ||||| || || Sbjct 1230 CCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAG 1171 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| |||| | || ||||||||||| |||||||| || ||||| || || || | || Sbjct 1170 AGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGT 1111 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||| || ||| || | | ||| || | ||| ||| Sbjct 1110 ATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACC 1051 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || || | ||||| |||||||| ||||| Sbjct 1050 TCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 >seq10174 Length=1708 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATA--GACTTC 48606 || || | ||| | ||| ||||| ||| || ||||||||||| || || | ||| | Sbjct 1050 AGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGAC--C 1107 Query 48607 GATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCT 48666 | | || || || ||||| || ||||| || || ||||| || |||| || | |||| Sbjct 1108 GCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCT 1167 Query 48667 CCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCG 48726 ||||||| ||| ||| || ||| | | ||| || || | || ||||| | | Sbjct 1168 CCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGG 1227 Query 48727 TAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 | || || || || || | |||||| ||||||||||||||| Sbjct 1228 TGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCATC 1268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380797897206393