Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2251 89.7 4e-13 >seq2251 Length=6394 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 ||||||||||| ||||| ||||| | || || |||||||| || || || ||| Sbjct 1001 AAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCT 1060 Query 28611 TCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || | | | | |||| || |||| || ||||| ||||| | || ||| Sbjct 1061 AGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAA-GACAAGGAGGGCATACCACCAGA 1119 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 || || ||||||||||||| ||||| || ||||| ||| |||| | |||| || Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| ||||| || || || | || || ||| |||||||||| Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGG 1230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425248789569489