Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq75 199 3e-45 seq966 147 1e-29 seq8839 123 2e-22 seq10174 120 2e-21 seq56 98.7 6e-15 seq210 91.5 1e-12 >seq75 Length=122079 Score = 199 bits (220), Expect = 3e-45 Identities = 376/547 (69%), Gaps = 6/547 (1%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||||||||||||||| || || | || || | || | || | || || || | Sbjct 119004 TTGGTATTGATTTAGGGACGACGTTTTCCTGCGTTGGCGTGTTTCAGCACGGCAAGGTGG 118945 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| || || || ||||| || ||| | || ||||| |||||| ||||||| || | Sbjct 118944 AAATTATCGCTAACGACCAGGGCAATCGTACTACACCGAGTTATGTTGCTTTTACGGATA 118885 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | || | ||| ||||| |||||||| || | || | ||| ||||| || ||| Sbjct 118884 CGGAGCGTCTCATTGGCGATGCTGCCAAGAACCAGGTTGCCATGAATCCCAGCAACACTG 118825 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | |||||||| || | |||||||| ||| || ||||| | |||| ||| |||| Sbjct 118824 TATTTGATGCAAAGCGCTTGATTGGACGTCGCTTCGATGACAAGGCTGTGCAAGGCGATA 118765 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA--GCAAT 474630 || ||||||||||| || ||||| ||| || || || || | || ||| | | | Sbjct 118764 TGAAACATTGGCCTTTCAAAGTGATCAATTCGGGCGGCAAGCCGAAGATTGAAGTGGAGT 118705 Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690 || || ||||| || || || || ||||| |||| || || ||||| | || Sbjct 118704 AC-CG-TGGTGAGACGAAGCAGTTCAGTGCGGAAGAAATATCATCTATGGTGCTGATGAA 118647 Query 474691 AATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTG 474749 ||||| | ||||| ||| | ||||| || | | || |||||||| |||||||| | Sbjct 118646 GATGAAGGAGACCGCAGAG-GCGTATCTGGGTAAGCAGGTGACTGATGCGGTAATTACGG 118588 Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 | || || || || || || ||| ||||| ||||| || ||||| |||| || ||| Sbjct 118587 TACCGGCTTACTTCAACGACAGTCAGCGTCAGGCAACGAAGGATGCTGGAACGATATCAG 118528 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 | | || || | |||||||| |||||||| |||||||| || | || || ||| | | Sbjct 118527 GAATGAACGTGCTGCGTATTATCAATGAACCGACAGCAGCTGCCATCGCCTACGGTTTAG 118468 Query 474870 ATAAGAA 474876 | ||||| Sbjct 118467 ACAAGAA 118461 >seq966 Length=15216 Score = 147 bits (162), Expect = 1e-29 Identities = 258/370 (70%), Gaps = 8/370 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT-TTATCAGGTCA 475851 ||||||||||||||||| || ||||| ||||| || ||||| | | || ||| | ||| Sbjct 2132 AATCCTGATGAAGCTGTCGCTTATGGCGCTGCAGTGCAAGCCGGTGTTATTAGC-GGTGT 2190 Query 475852 ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCT 475911 || ||| ||| | |||| || || |||| || ||| | | | ||| | Sbjct 2191 T---GA--AGATACTGG-TGATATCGTGCTCCTTGATGTTTGCCCATTGACCATGGGTAT 2244 Query 475912 TGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA 475971 ||| || || ||||| ||||||| || |||||| ||| |||||| || || ||| Sbjct 2245 TGAGACTGTGGGAGGCGTTATGACCAAACTTATTCCCAGGAATACTGTCATTCCCACCAA 2304 Query 475972 AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTT 476031 ||| || || | || || || | |||| ||||| |||| || ||||| || | || Sbjct 2305 AAAGTCGCAAATTTTCTCTACAGCTGCTGACAATCAGCCAACCGTTACCATTCAGGTGTT 2364 Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091 ||| ||||| | | | |||||||||||| | || || | ||| |||| ||| Sbjct 2365 TGAGGGTGAGCGTCCAATGACTAAAGATAATCATTTCCTGGGTAAGTTTGATCTGACAGG 2424 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 |||||||| |||||| | || | || ||||||||||| || || || ||||||| || Sbjct 2425 CATTCCTCCGGCTCCCCGTGGTTTACCCCAAATTGAAGTCACCTTCGAGATTGATGTGAA 2484 Query 476152 TGGTATTCTT 476161 |||||||||| Sbjct 2485 TGGTATTCTT 2494 Score = 120 bits (132), Expect = 2e-21 Identities = 338/511 (66%), Gaps = 15/511 (3%) Strand=Plus/Plus Query 474363 GTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAA 474422 |||| | ||||| | ||||| || ||||| || || || |||||||| ||| ||| Sbjct 1092 GTGTTGGTGTTTTCAAGAATGGACGTGTTGAAATCATCGCAAACGACCAAGGCAATCGAA 1151 Query 474423 CAACACCATCATATGTTTCTTTTACTGAA-ACTG--AACATCTTATTGGAGATGCTGCTA 474479 ||| ||||| |||||| | ||| ||| || | ||| || ||||| || ||||| | Sbjct 1152 TAACTCCATCTTATGTTGCATTTTCTGGTGACGGGGAACGGCTAATTGGTGACGCTGCCA 1211 Query 474480 AATATCAAGCTG-CATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGT 474538 || |||| |||| | || ||||| |||||| | |||||||| ||| | | || ||| Sbjct 1212 AAAATCA-GCTGACTTCGAATCCCAAGAATACTTTGTTTGATGCCAAACGTCTCATCGGT 1270 Query 474539 CGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATA 474598 ||| ||| ||| || | ||| || |||||| | || || ||||| ||||| Sbjct 1271 CGTGATTATGACGACAAAGATGTGCAGAGTGATATTAAACGTTACCCCTTTAAAGTGATC 1330 Query 474599 AATGTTGGTGGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAA-ACAA----T 474653 || | ||||| || || | | | || | |||| ||| | | || | Sbjct 1331 AACAAAAACAGCAAACCGTACATGCAGG---TGCAAGTAGGT--AACGAGGAGAAGGGGT 1385 Query 474654 TTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCAT 474713 | | || || | |||| | |||||| | |||||||| | | || | | Sbjct 1386 TCGCTCCTGAGGAGGTTTCGGCTATGGTTCTCAGTAAAATGAAGGAGATTGCTGAAGCCT 1445 Query 474714 ATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTC 474773 |||||||| ||||| || | || || | ||||| || || ||||||||||| | | Sbjct 1446 ATCTTGGAACTGAAGTCACACACGCTGTTGTCACTGTGCCTGCTTATTTTAATGACGCCC 1505 Query 474774 AACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTA 474833 ||||||||||||| ||||| || || || || || | | ||| || || || |||| Sbjct 1506 AACGTCAAGCAACCAAAGACGCTGGTGCTATAGCTGGCTTGACTGTCTTGCGAATCATTA 1565 Query 474834 ATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 |||| || || || || || ||||||| || Sbjct 1566 ATGAGCCTACCGCCGCAGCGATTGCTTACGG 1596 >seq8839 Length=1967 Score = 123 bits (136), Expect = 2e-22 Identities = 358/545 (66%), Gaps = 6/545 (1%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||||||||| ||||| || | | ||||| | ||| | ||| | || || || || Sbjct 1946 GGTATTGATTTGGGAACGACGTTCTCATGTGTGGGTGTGTTCCAACACGGCAAGGTGGAG 1887 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 ||||| |||||||| ||||| || | || || || ||||| | || || || || Sbjct 1886 ATAATCGCCAATGATCAAGGCAACCGCACGACGCCGAGTTATGTGGCCTTCACGGATACG 1827 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 || | ||| || || ||||| || || |||| | || || || || || | Sbjct 1826 GAGCGTCTGATCGGCGATGCCGCGAAGAATCAGGTAGCCATGAACCCCACCAACACAGTG 1767 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 |||||||| || | ||||||| ||| |||||| |||| | || || || ||| Sbjct 1766 TTTGATGCGAAGCGTCTGATTGGACGTCGTTTTGACGATAGGGCAGTGCAGGAGGACATG 1707 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATAGAAGCAATAC 474632 || ||||| || ||||||||||||| || || || || | ||| || | | || Sbjct 1706 AAGCACTGGCCGTTCAAGGTGATAAATGCGGGAGGGAAGCCGAAGATAGAGGTGGAGTA- 1648 Query 474633 ACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAA 474692 || ||||| | || || || |||| | || || || ||||| | || | Sbjct 1647 TCG-TGGTGAGAGGAAGCAGTTCAGTGCGGAGGAGATATCGTCGATGGTGCTGTTGAAGA 1589 Query 474693 TGAAACAAACCGCGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTT 474751 |||| | || ||| | ||| |||| | ||| || || |||||||| || || || Sbjct 1588 TGAAGGAGACGGCGGAGGCGTAT-TTGGGGAGGAAGGTGACGGATGCAGTGATCACAGTG 1530 Query 474752 CCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 || || || || || || ||| ||||| || || || |||||||| | || | ||| Sbjct 1529 CCTGCGTACTTCAACGACAGTCAGCGTCAGGCGACGAAGGATGCGGGTACGATATCGGGT 1470 Query 474812 CTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGAT 474871 | ||||| | || || || ||||| || || || || || | || ||||| | || Sbjct 1469 TTGAATGTGCTGCGCATCATCAATGAGCCGACGGCGGCGGCGATAGCGTATGGATTGGAC 1410 Query 474872 AAGAA 474876 ||||| Sbjct 1409 AAGAA 1405 >seq10174 Length=1708 Score = 120 bits (132), Expect = 2e-21 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| || || || || ||| || || | | | Sbjct 1046 ACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGA 1105 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | |||||| ||||||||||||||||| || || || ||||| || || Sbjct 1106 CCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACC 1165 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||| ||| || ||| ||||||| |||| || | ||||| Sbjct 1166 CTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAG 1225 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || ||||||||||| || || ||||| || Sbjct 1226 GGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTG 1264 >seq56 Length=142406 Score = 98.7 bits (108), Expect = 6e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || || |||||||| || ||||| |||||||| || ||||| || || || || | Sbjct 120284 ATGCGGTCATCACTGTTCCCGCGTATTTCAATGATTCCCAGCGTCAGGCCACCAAGGACG 120225 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||| || | |||||| | ||| | || ||||| ||||| || || || | Sbjct 120224 CTGGTCAAATTGCTGGGTTAAATGTTCTTCGTGTCATAAATGAGCCAACTGCGGCTGCTC 120165 Query 474855 TTGCTTATGGTCTTGAT 474871 |||||||||| || ||| Sbjct 120164 TTGCTTATGGCCTGGAT 120148 >seq210 Length=64943 Score = 91.5 bits (100), Expect = 1e-12 Identities = 157/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||||||||| || |||||||| || || ||| |||| ||| || || |||| ||| Sbjct 30377 ACGAAGACGAAGCACAAGATGCAGAGTTGACTC-CTTTTGAATG-TTGTAGTCAGACAGA 30434 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | |||||| || ||||| || ||||| || | ||| || || || || ||||| Sbjct 30435 GTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATG 30494 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTC 480727 || ||||||||||||||||| || ||| || || | ||| | | | | | | Sbjct 30495 CCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCC 30554 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||||| || || || || ||||| || || ||||| Sbjct 30555 AA-GGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTG 30595 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || || || | |||||| || ||| || | ||| || || | ||||| Sbjct 30833 ACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGT 30892 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | ||||| || || || || | ||| || ||||| || || || || Sbjct 30893 GCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCC 30952 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||||||||||| || ||| ||||| | |||| || | | ||| || Sbjct 30953 CTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAG 31012 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || || || || ||||| || || ||||| Sbjct 31013 AGTAATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTG 31051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266888451008468