Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 98.7 1e-15
seq4589 84.2 3e-11
>seq4951
Length=3275
Score = 98.7 bits (108), Expect = 1e-15
Identities = 171/244 (70%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||||||||||| ||||||||| | || || || ||||| |||||| | ||| ||| |
Sbjct 2435 CCTCAGTACATGTTTATGCGGGTCTCGATAGGTATTCACGGCGAAGACGTGGATGCTGCC 2376
Query 75272 TTGGAGACATACGACAAGATGTC-CCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| | ||||| || || ||| ||||| || ||||||| |||||
Sbjct 2375 ATTGAGACGTACAATCTAATGTCTGGAAAGT-GGTTGATTCATGCCTCACCAACGCTCTT 2317
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
|| ||||| || || | | |||||||| || ||||| | || | | ||||| ||
Sbjct 2316 TAACGCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAAGGATGA 2257
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTC--AAAGTG-GGC 75447
| ||| | || || || | || || | ||||||| | ||||| |||||| ||
Sbjct 2256 CAGTATCGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAGTGCGGG 2197
Query 75448 TGGG 75451
||||
Sbjct 2196 TGGG 2193
Score = 91.5 bits (100), Expect = 2e-13
Identities = 192/285 (67%), Gaps = 6/285 (2%)
Strand=Plus/Minus
Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958
|||| || || || | || | ||||||||| |||||| |||||||| |||| ||
Sbjct 1539 CAGATCGAAACAGGCAATCCCTTTATGCTTTATAAGGATTCTTGTAACCGGAAGTCCAAT 1480
Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACA-- 76016
|| | || | || || || ||| |||||||||||||||| || ||| | |||||||
Sbjct 1479 CATCAACATCTAGGGACTATAAAGTGCTCAAATCTTTGCACCGAGATTGTCGAGTACAGT 1420
Query 76017 -CAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075
| || | ||||| ||||| ||||||||||| || || |||| || || | |||
Sbjct 1419 TCGCCTACG---GAGACTGCTGTGTGCAATTTGGCTTCTATTTCCCTCCCCAACTTTGTG 1363
Query 76076 AATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACC 76135
|| | || | |||||| | | ||| | || | | || | | | ||
Sbjct 1362 AACACAAGCACAAAGAGTTTTGACTTCAACAAATTGCAGTATGTGACTGAAGTCATAACG 1303
Query 76136 AAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAG 76180
|||||||| ||| | | |||||| | || | ||||||||| |||
Sbjct 1302 AAAAATCTTAACAAAATAATTGACCGGAACTGTTATCCCGTGGAG 1258
>seq4589
Length=3505
Score = 84.2 bits (92), Expect = 3e-11
Identities = 166/243 (68%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 64987 TTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAA 65046
|||||| | ||||| ||||| | ||||| | | ||||||||| | |||||| | ||
Sbjct 2626 TTATTTAACGCCATTCAAACGCTGCCATGCGTCGCTAAGAAGGCGGATTGGGCACTTAAG 2567
Query 65047 TGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAG 65106
||| | | | ||| || | ||| ||||| | | || || || | | |||
Sbjct 2566 TGGATCGCGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAG 2507
Query 65107 GGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCAT 65165
||| | ||||||||||| || || ||| |||||| |||| | |||||||| ||||||||
Sbjct 2506 GGTGTTTTCTTCTCCGGTTCGTT-TGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCAT 2448
Query 65166 GCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT 65225
||| || || |||| || || || || || ||||| || || ||| || ||
Sbjct 2447 GCCTGGTCTTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTT 2388
Query 65226 TGC 65228
|||
Sbjct 2387 TGC 2385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596345207802080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |