Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4951 98.7 1e-15 seq4589 84.2 3e-11 >seq4951 Length=3275 Score = 98.7 bits (108), Expect = 1e-15 Identities = 171/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||||||||||| ||||||||| | || || || ||||| |||||| | ||| ||| | Sbjct 2435 CCTCAGTACATGTTTATGCGGGTCTCGATAGGTATTCACGGCGAAGACGTGGATGCTGCC 2376 Query 75272 TTGGAGACATACGACAAGATGTC-CCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| | ||||| || || ||| ||||| || ||||||| ||||| Sbjct 2375 ATTGAGACGTACAATCTAATGTCTGGAAAGT-GGTTGATTCATGCCTCACCAACGCTCTT 2317 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 || ||||| || || | | |||||||| || ||||| | || | | ||||| || Sbjct 2316 TAACGCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAAGGATGA 2257 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTC--AAAGTG-GGC 75447 | ||| | || || || | || || | ||||||| | ||||| |||||| || Sbjct 2256 CAGTATCGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAGTGCGGG 2197 Query 75448 TGGG 75451 |||| Sbjct 2196 TGGG 2193 Score = 91.5 bits (100), Expect = 2e-13 Identities = 192/285 (67%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 |||| || || || | || | ||||||||| |||||| |||||||| |||| || Sbjct 1539 CAGATCGAAACAGGCAATCCCTTTATGCTTTATAAGGATTCTTGTAACCGGAAGTCCAAT 1480 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACA-- 76016 || | || | || || || ||| |||||||||||||||| || ||| | ||||||| Sbjct 1479 CATCAACATCTAGGGACTATAAAGTGCTCAAATCTTTGCACCGAGATTGTCGAGTACAGT 1420 Query 76017 -CAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075 | || | ||||| ||||| ||||||||||| || || |||| || || | ||| Sbjct 1419 TCGCCTACG---GAGACTGCTGTGTGCAATTTGGCTTCTATTTCCCTCCCCAACTTTGTG 1363 Query 76076 AATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACC 76135 || | || | |||||| | | ||| | || | | || | | | || Sbjct 1362 AACACAAGCACAAAGAGTTTTGACTTCAACAAATTGCAGTATGTGACTGAAGTCATAACG 1303 Query 76136 AAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAG 76180 |||||||| ||| | | |||||| | || | ||||||||| ||| Sbjct 1302 AAAAATCTTAACAAAATAATTGACCGGAACTGTTATCCCGTGGAG 1258 >seq4589 Length=3505 Score = 84.2 bits (92), Expect = 3e-11 Identities = 166/243 (68%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 64987 TTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAA 65046 |||||| | ||||| ||||| | ||||| | | ||||||||| | |||||| | || Sbjct 2626 TTATTTAACGCCATTCAAACGCTGCCATGCGTCGCTAAGAAGGCGGATTGGGCACTTAAG 2567 Query 65047 TGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAG 65106 ||| | | | ||| || | ||| ||||| | | || || || | | ||| Sbjct 2566 TGGATCGCGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAG 2507 Query 65107 GGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCAT 65165 ||| | ||||||||||| || || ||| |||||| |||| | |||||||| |||||||| Sbjct 2506 GGTGTTTTCTTCTCCGGTTCGTT-TGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCAT 2448 Query 65166 GCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT 65225 ||| || || |||| || || || || || ||||| || || ||| || || Sbjct 2447 GCCTGGTCTTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTT 2388 Query 65226 TGC 65228 ||| Sbjct 2387 TGC 2385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596345207802080