Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 107 3e-18
>seq4589
Length=3505
Score = 107 bits (118), Expect = 3e-18
Identities = 360/558 (65%), Gaps = 9/558 (2%)
Strand=Plus/Plus
Query 18127 TTTATTAATTATGTGATTATAATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATC 18186
|||||| | ||||| || || | || ||||||||| || ||||| | ||||||||
Sbjct 2354 TTTATTGACAATGTGCTTGAAA---ATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATC 2410
Query 18187 TCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCttttttttAGCCA 18246
| || | |||||||| || || | || ||||| | ||| | || || |||||
Sbjct 2411 GCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCA 2470
Query 18247 AAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAAC-GCACGCGAACGCTATTA 18305
||| || || || || || || ||||| | |||||||| ||| ||||| || | |
Sbjct 2471 AAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATAGCA-GCGAAAGCCACCA 2529
Query 18306 ATCTTTCAGCAAAACTGTATTTATTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNN 18365
| ||||| | | || || ||||| || ||||||| || | |
Sbjct 2530 CACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCT 2589
Query 18366 NNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTT 18425
| || || | | | || || ||||| ||| ||| ||| | || |
Sbjct 2590 TAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCT 2649
Query 18426 TTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCT 18485
| | ||| || ||||| | | |||||||||||||||||| ||| | || | || | |
Sbjct 2650 TGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTT 2709
Query 18486 GAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACC- 18544
| | | |||||| | | |||||| ||| ||||| ||| || |||| ||| |
Sbjct 2710 GCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTCGTTACAAAAA--TTCAAGGT 2767
Query 18545 -AAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAA 18603
||||| || ||||| || || ||| | ||| || || |||| |||||| ||| ||
Sbjct 2768 TAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAA 2827
Query 18604 ATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTC 18663
||| |||| ||| |||||||| | ||| || | ||| || | || |||||| ||
Sbjct 2828 GTGTCGTTCACCATCATTGAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTC 2887
Query 18664 TTCCGATGTCCAAAAAGA 18681
|| |||||||||||
Sbjct 2888 CTCAACCGTCCAAAAAGA 2905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731596715495600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |