Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq4589 107 3e-18 >seq4589 Length=3505 Score = 107 bits (118), Expect = 3e-18 Identities = 360/558 (65%), Gaps = 9/558 (2%) Strand=Plus/Plus Query 18127 TTTATTAATTATGTGATTATAATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATC 18186 |||||| | ||||| || || | || ||||||||| || ||||| | |||||||| Sbjct 2354 TTTATTGACAATGTGCTTGAAA---ATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATC 2410 Query 18187 TCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCttttttttAGCCA 18246 | || | |||||||| || || | || ||||| | ||| | || || ||||| Sbjct 2411 GCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCA 2470 Query 18247 AAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAAC-GCACGCGAACGCTATTA 18305 ||| || || || || || || ||||| | |||||||| ||| ||||| || | | Sbjct 2471 AAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATAGCA-GCGAAAGCCACCA 2529 Query 18306 ATCTTTCAGCAAAACTGTATTTATTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNN 18365 | ||||| | | || || ||||| || ||||||| || | | Sbjct 2530 CACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCT 2589 Query 18366 NNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTT 18425 | || || | | | || || ||||| ||| ||| ||| | || | Sbjct 2590 TAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCT 2649 Query 18426 TTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCT 18485 | | ||| || ||||| | | |||||||||||||||||| ||| | || | || | | Sbjct 2650 TGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTT 2709 Query 18486 GAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACC- 18544 | | | |||||| | | |||||| ||| ||||| ||| || |||| ||| | Sbjct 2710 GCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTCGTTACAAAAA--TTCAAGGT 2767 Query 18545 -AAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAA 18603 ||||| || ||||| || || ||| | ||| || || |||| |||||| ||| || Sbjct 2768 TAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAA 2827 Query 18604 ATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTC 18663 ||| |||| ||| |||||||| | ||| || | ||| || | || |||||| || Sbjct 2828 GTGTCGTTCACCATCATTGAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTC 2887 Query 18664 TTCCGATGTCCAAAAAGA 18681 || ||||||||||| Sbjct 2888 CTCAACCGTCCAAAAAGA 2905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731596715495600