Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq10174 87.8 3e-12
seq4589 87.8 3e-12
>seq10174
Length=1708
Score = 87.8 bits (96), Expect = 3e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | ||| || | || | ||| | || | ||| || |||||| || || ||
Sbjct 1040 ACCACCACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGA 1099
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|| || || | || || ||||| || ||||||||||| | | ||| ||||| || ||
Sbjct 1100 CAAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGG 1159
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| || || || ||||| ||||| || ||||| |||| || || | ||| ||
Sbjct 1160 GATACCCTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAAC 1219
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || ||||| || || || | ||||| | || ||||||||
Sbjct 1220 CTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267
>seq4589
Length=3505
Score = 87.8 bits (96), Expect = 3e-12
Identities = 173/254 (68%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475
|||||||||||||||||| | || | || | ||| | | |||||| | ||
Sbjct 2672 AGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGC 2731
Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAAC--TAAATTCTCAGATACAATACCA 39533
|| | | ||||||||| | | || ||||| |||||| || || || |||
Sbjct 2732 CTCAGGAACTTGAACTTCGTTACAAAAA--TTCAAGGTTAAATTTTCGTTAACGATGCCA 2789
Query 39534 TCAGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAA 39593
||| ||||| ||||| || | |||||| |||||| ||| |||| ||| || | |
Sbjct 2790 TCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAGA 2849
Query 39594 TTTTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCT 39653
||||||||| |||||| || | |||||| || || || | ||||||||||| ||
Sbjct 2850 TTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCG 2909
Query 39654 ACGGATTTTTTATA 39667
|| | ||| |||||
Sbjct 2910 ACAGCTTTCTTATA 2923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904795544407800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |