Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq89 96.9 1e-14
>seq89
Length=114867
Score = 96.9 bits (106), Expect = 1e-14
Identities = 217/321 (68%), Gaps = 4/321 (1%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
||||| ||| || | || || || || ||||| ||| || ||| || ||||||||
Sbjct 42412 TCCATTGCCTTCATCAGTCGGCGTTGGATGTAACCGGTTTCAGCTGTCTTGACAGCTGTG 42353
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
||||||| || ||||||||||||| || |||||||| | || ||| || |||
Sbjct 42352 TCAATTAAGCCTTCACGACCACCCATTGCGTGGAAGAAAAATTCGGTTGGTGTCAGACCC 42293
Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAA 302753
| | | ||||| |||||||||| || | | ||| || | |||| |||| ||||
Sbjct 42292 GCTAAATAGGAGTTCTCAACGAATCCTCTTGACTCAGGGCCGTAGTCG-TCTTGAATAAA 42234
Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813
||| || || || | | | | ||| |||| | |||||| || ||||| || || ||
Sbjct 42233 GTGGGGAAGAGTGCGATGCCTGAAACCGAATGGCACACGCTTACCTTCAACATTTTGTTG 42174
Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATTTAAATCAC-TGCCCTTGGAGCCAGCATTTA 302872
||| | || | || | || || || ||| | || | ||||| || || ||| |
Sbjct 42173 TCCAACACAAGCGATAACTTGAGAGATGTTT-ATTCTCGAACCCTTCGATCCCGCAACAA 42115
Query 302873 CCATAATAACAAACCTGTTAT 302893
|||||||| ||| | ||||
Sbjct 42114 CCATAATATTAAAGTTATTAT 42094
Score = 91.5 bits (100), Expect = 4e-13
Identities = 135/189 (71%), Gaps = 3/189 (2%)
Strand=Plus/Minus
Query 303627 TTGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTC 303686
||| |||| ||| | |||||| ||||||||||| |||||||| || || || || |
Sbjct 41327 TTGAGGCAAATGGAGATTCATTTCATCACCGTCGAAATCAGCGTTGTATGGTGAAGTAAC 41268
Query 303687 CGCAACGTTCATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTATGACACATCAT 303746
| | || | || || || | ||| || || |||||| || ||| ||||||||
Sbjct 41267 AGATAAATTTAAACGAAATGT-TGACCATGG--CAAAACACGAACTCGATGGCACATCAT 41211
Query 303747 AGACATTCTGTGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACCGTTTAATACATG 303806
|||||| |||||| || |||||||||||||||| || |||| |||||| | |||
Sbjct 41210 GGACATTTTGTGTAACGTAGGCTGACGATTGAAAACAACAAAGTCATCGTTTAGCATATG 41151
Query 303807 ACGATGAAC 303815
|| | |||
Sbjct 41150 GCGCTCAAC 41142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471250154062667
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |