Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 1e-14 >seq89 Length=114867 Score = 96.9 bits (106), Expect = 1e-14 Identities = 217/321 (68%), Gaps = 4/321 (1%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 ||||| ||| || | || || || || ||||| ||| || ||| || |||||||| Sbjct 42412 TCCATTGCCTTCATCAGTCGGCGTTGGATGTAACCGGTTTCAGCTGTCTTGACAGCTGTG 42353 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||||| || ||||||||||||| || |||||||| | || ||| || ||| Sbjct 42352 TCAATTAAGCCTTCACGACCACCCATTGCGTGGAAGAAAAATTCGGTTGGTGTCAGACCC 42293 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG-GTAAA 302753 | | | ||||| |||||||||| || | | ||| || | |||| |||| |||| Sbjct 42292 GCTAAATAGGAGTTCTCAACGAATCCTCTTGACTCAGGGCCGTAGTCG-TCTTGAATAAA 42234 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 ||| || || || | | | | ||| |||| | |||||| || ||||| || || || Sbjct 42233 GTGGGGAAGAGTGCGATGCCTGAAACCGAATGGCACACGCTTACCTTCAACATTTTGTTG 42174 Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATTTAAATCAC-TGCCCTTGGAGCCAGCATTTA 302872 ||| | || | || | || || || ||| | || | ||||| || || ||| | Sbjct 42173 TCCAACACAAGCGATAACTTGAGAGATGTTT-ATTCTCGAACCCTTCGATCCCGCAACAA 42115 Query 302873 CCATAATAACAAACCTGTTAT 302893 |||||||| ||| | |||| Sbjct 42114 CCATAATATTAAAGTTATTAT 42094 Score = 91.5 bits (100), Expect = 4e-13 Identities = 135/189 (71%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 303627 TTGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTC 303686 ||| |||| ||| | |||||| ||||||||||| |||||||| || || || || | Sbjct 41327 TTGAGGCAAATGGAGATTCATTTCATCACCGTCGAAATCAGCGTTGTATGGTGAAGTAAC 41268 Query 303687 CGCAACGTTCATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTATGACACATCAT 303746 | | || | || || || | ||| || || |||||| || ||| |||||||| Sbjct 41267 AGATAAATTTAAACGAAATGT-TGACCATGG--CAAAACACGAACTCGATGGCACATCAT 41211 Query 303747 AGACATTCTGTGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACCGTTTAATACATG 303806 |||||| |||||| || |||||||||||||||| || |||| |||||| | ||| Sbjct 41210 GGACATTTTGTGTAACGTAGGCTGACGATTGAAAACAACAAAGTCATCGTTTAGCATATG 41151 Query 303807 ACGATGAAC 303815 || | ||| Sbjct 41150 GCGCTCAAC 41142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471250154062667