Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2251 129 5e-25 seq210 127 2e-24 seq30086 100 3e-16 >seq2251 Length=6394 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| || || || ||||| || || || || || || | | | Sbjct 1004 ATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCTAGC 1063 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| | | || |||| ||| | ||| || |||||||| || || ||||| || || || Sbjct 1064 GACTCTATTGAGAACGTCAAAGCGAAA-ATTCAAGACAAGGAGGGCATACCACCAGACCA 1122 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||| | ||||||||||| || ||| |||||||| | ||| | || || || || Sbjct 1123 GCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTACAA 1182 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||||||||| || || | || ||| || | || ||||| Sbjct 1183 CATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGG 1230 >seq210 Length=64943 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || |||||||| || || |||||||| || ||||| || ||| Sbjct 31054 ATGCAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGAGCCCAGT 30995 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | | || | ||||| ||||| |||||||| || || || || || ||||| Sbjct 30994 GATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAG 30935 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| ||||| ||||| || ||| |||| ||| | | |||| || || || Sbjct 30934 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 30875 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||||||||| || || |||||| | ||| | || || ||| Sbjct 30874 ATACAAAAGGAATCGACCCTTCATTTGGTGCTTCGACTTCGTGGTGGC 30827 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| | ||||| || || || || || ||||| || || || || | | Sbjct 42171 GATGCAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGAGCCGAG 42230 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || | |||| | || || ||||| || ||||| || || || || || || || Sbjct 42231 TGATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCA 42290 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | |||||||| || |||||| ||||||| | | |||| || || || Sbjct 42291 ACAACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAA 42350 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||||||| || || || || |||||| |||| ||||| || ||| Sbjct 42351 CATTCAAAAGGAGTCAACCCTTCATTTGGTGCTGCGTTTGCGAGGTGGC 42399 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | |||||| | || || || |||||||| | || || || | | Sbjct 39253 GATGCAAATCTTTGTGAAAACGTTGACGGGCAAGACTATTACATTGGAGGTGGAGCCAAG 39312 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| | | || | || || |||||||||||||| || || || || || || || Sbjct 39313 TGACTCGATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCA 39372 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| |||||||||||||| || || ||| |||| ||| | | |||| || || || Sbjct 39373 ACAGCGTTTGATCTTTGCAGGAAAGCAGTTGGAAGATGGTCGTACTCTGTCTGACTACAA 39432 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||||||| || || || | || |||||| | ||| | || || ||| Sbjct 39433 CATTCAAAAAGAGTCAACTTTGCATTTGGTGCTTCGACTTCGTGGTGGC 39481 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || |||||||| || || || ||||| || || || || ||| Sbjct 39710 ATGCAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGAGCCCAGT 39769 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | | || | || || ||||| |||||||| || || || || || ||||| Sbjct 39770 GATTCCATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAG 39829 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| ||||| ||||| || ||| |||| ||| | | |||| || || || Sbjct 39830 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39889 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||||||||| || || |||||| | ||| | || || ||| Sbjct 39890 ATACAAAAGGAATCGACCCTTCATTTGGTGCTTCGACTTCGTGGTGGC 39937 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||| | || || || || ||||| | || || || | | Sbjct 30826 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 30767 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | |||| | || || |||||||||||||| || || || || || || ||| Sbjct 30766 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 30707 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| ||||| ||||| || ||| |||| ||| | | | |||| || || || Sbjct 30706 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 30647 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| | || |||||| | ||| | || || ||| Sbjct 30646 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCGTGGTGGC 30599 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||| | || || || || ||||| | || || || | | Sbjct 39938 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39997 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | |||| | || || |||||||||||||| || || || || || || ||| Sbjct 39998 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 40057 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| ||||| ||||| || ||| |||| ||| | | | |||| || || || Sbjct 40058 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 40117 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| | || |||||| | ||| | || || ||| Sbjct 40118 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCGTGGTGGC 40165 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||||| || || || |||||||| | || || || | | Sbjct 30598 ATGCAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGAGCCGAGT 30539 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | |||| | || || ||||| |||||||| || || || || || || || Sbjct 30538 GACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAG 30479 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| ||||| || || |||||||| ||| | | |||| || || ||| Sbjct 30478 CAGCGTTTGATATTTGCGGGTAAGCAGCTGGAAGATGGTCGCACTCTGTCTGACTACAAC 30419 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||||||||| || || || || |||| Sbjct 30418 ATTCAAAAGGAGTCAACTCTGCATCTTG 30391 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||||| || || || || ||||| | || || || | | Sbjct 39482 ATGCAAATATTTGTGAAGACGCTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39541 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | |||| | || || || ||||||||||| || || || || || || || Sbjct 39542 GACTCGATAGAGAATGTGAAGGCGAAAATCCAAGACAAGGAGGGCATTCCACCGGACCAG 39601 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| ||||| || || ||| |||| ||| | | |||| || || || Sbjct 39602 CAGCGTTTGATATTTGCGGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39661 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || || |||||| | ||| | || || ||| Sbjct 39662 ATACAAAAGGAGTCGACTCTTCATTTGGTGCTCCGACTTCGTGGTGGC 39709 >seq30086 Length=500 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||| | || || || || ||||| | || || || | | Sbjct 356 ATGCAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 297 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | |||| | || || |||||||||||||| || || || || || || ||| Sbjct 296 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 237 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| ||||| ||||| || ||| |||| ||| | | | |||| || || || Sbjct 236 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 177 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| | || |||||| | ||| | || || ||| Sbjct 176 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCGTGGTGGC 129 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| |||||||| || || || || || ||||| || ||||| ||||| ||||| || Sbjct 500 AAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAGCAGCGTTTAATCTTCGCCGGTAAG 441 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||| |||| ||| | | |||| || || || || |||||||||||||| || || Sbjct 440 CAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATATACAAAAGGAATCGACCCTTCAT 381 Query 24908 TTGGTGTTGCGATTGCGCGGAGGC 24931 |||||| | ||| | || || ||| Sbjct 380 TTGGTGCTTCGACTTCGTGGTGGC 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449728376641480