Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 109 5e-19
seq210 98.7 8e-16
seq25 84.2 2e-11
>seq2251
Length=6394
Score = 109 bits (120), Expect = 5e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 110269 TAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCC 110328
|||||||||||| ||||| ||||| | || || |||||||| || | || |||||
Sbjct 1000 TAAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCC 1059
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
| ||| || | | | || ||| ||| ||| ||||| || ||| | || ||
Sbjct 1060 TAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
|| ||| ||||||| | ||| || || ||| ||||||||| |||| | | || ||
Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||||||||| ||||| ||| | || | || || ||||| ||||| ||||
Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGGAA 1232
>seq210
Length=64943
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||||||| | || ||||| || |||||| | || ||||||
Sbjct 42172 ATGCAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGAGCCGAGT 42231
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||| | | | | || || ||||||| ||||| || ||| | || ||| |||
Sbjct 42232 GATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAA 42291
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | ||| ||||||||| ||||||| | | || || |||| ||||||
Sbjct 42292 CAACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAAC 42351
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || || || | || ||||| | | ||||||| ||
Sbjct 42352 ATTCAAAAGGAGTCAACCCTTCATTTGGTGCTGCGTTTGCGAGGTGG 42398
>seq25
Length=187393
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 107176 GCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGA 107235
|||||| || || |||||||||||||| ||||| | | |||||||| || |||||||
Sbjct 97946 GCACGGATTTCATGTGCACGAATTTGGAGACACAACAGATGGCTGTACATCTGCCGGTGC 97887
Query 107236 ACACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAGAAAGGCACGTCGG 107295
||||| || ||| | |||| || ||||| || || || | || |||| || ||
Sbjct 97886 TCACTTTAACCCCCACGGCAAAAACCATGGTGCTCCTGATGCAGCTGAGCGGCATGTTGG 97827
Query 107296 CGATCTGGGCAACGTC 107311
||||| || ||||||
Sbjct 97826 GGATCTTGGTAACGTC 97811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412690196922863
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |