Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 114 2e-19
seq1613 96.9 5e-14
>seq4589
Length=3505
Score = 114 bits (126), Expect = 2e-19
Identities = 226/329 (69%), Gaps = 9/329 (3%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
||||| ||||||||||||| ||||| || ||| || || |||||||| || ||||||
Sbjct 2403 CCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGACCACGCTTC 2462
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AAA 794459
||||||||||| || | | || || ||||| || | ||||| | || || |||
Sbjct 2463 TTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAA 2522
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT--TTGTTGATCCACTTCATCGCC 794517
||| || | ||||| || || | | ||||||| || ||||||||| | |||
Sbjct 2523 GCC-ACCACACGCTCAGC----GT-ACGATGCCCTCTTATTCGCGATCCACTTAAGTGCC 2576
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577
|| || ||||| || || | |||| ||| | |||||| ||| | || |
Sbjct 2577 CAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCACGC 2636
Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637
|| ||||||||||||| || || ||||| || || || || | || || || |||||
Sbjct 2637 TCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATGTTC 2696
Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| | ||| | || | |||||||| ||
Sbjct 2697 TCAACGGCCACTTGCATTCCATAAAAACA 2725
>seq1613
Length=8839
Score = 96.9 bits (106), Expect = 5e-14
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 2035593 TGGGA-CAAGGCCTTTTGCGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGC 2035651
||||| |||| || |||||| | || ||| || || |||||| | ||||| || ||
Sbjct 6780 TGGGATCAAGAGTTTCTGCGAGTT-GATCAAGGGACACTTTTTGAGCTCATCCTTGCGGC 6722
Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711
||| || || ||||| ||| || || ||| | | || ||| | || |||||| | ||
Sbjct 6721 CAATTATCTTGACATAAAGGGTCTGCTTGATACGTGTTGTAAGTCTGTTGCCAACATGAT 6662
Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGT 2035758
|||||||||| | || ||||| || ||||| ||||| ||||| ||||
Sbjct 6661 CAAGGGCAAGACACCTGAGGAAATTCGCAAAACCTTCAACATAAAGT 6615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7913045483084949
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |