Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4589 114 2e-19 seq1613 96.9 5e-14 >seq4589 Length=3505 Score = 114 bits (126), Expect = 2e-19 Identities = 226/329 (69%), Gaps = 9/329 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| ||||||||||||| ||||| || ||| || || |||||||| || |||||| Sbjct 2403 CCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGACCACGCTTC 2462 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AAA 794459 ||||||||||| || | | || || ||||| || | ||||| | || || ||| Sbjct 2463 TTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAA 2522 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT--TTGTTGATCCACTTCATCGCC 794517 ||| || | ||||| || || | | ||||||| || ||||||||| | ||| Sbjct 2523 GCC-ACCACACGCTCAGC----GT-ACGATGCCCTCTTATTCGCGATCCACTTAAGTGCC 2576 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || ||||| || || | |||| ||| | |||||| ||| | || | Sbjct 2577 CAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCACGC 2636 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || ||||||||||||| || || ||||| || || || || | || || || ||||| Sbjct 2637 TCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATGTTC 2696 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || | ||| | || | |||||||| || Sbjct 2697 TCAACGGCCACTTGCATTCCATAAAAACA 2725 >seq1613 Length=8839 Score = 96.9 bits (106), Expect = 5e-14 Identities = 123/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 2035593 TGGGA-CAAGGCCTTTTGCGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGC 2035651 ||||| |||| || |||||| | || ||| || || |||||| | ||||| || || Sbjct 6780 TGGGATCAAGAGTTTCTGCGAGTT-GATCAAGGGACACTTTTTGAGCTCATCCTTGCGGC 6722 Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711 ||| || || ||||| ||| || || ||| | | || ||| | || |||||| | || Sbjct 6721 CAATTATCTTGACATAAAGGGTCTGCTTGATACGTGTTGTAAGTCTGTTGCCAACATGAT 6662 Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGT 2035758 |||||||||| | || ||||| || ||||| ||||| ||||| |||| Sbjct 6661 CAAGGGCAAGACACCTGAGGAAATTCGCAAAACCTTCAACATAAAGT 6615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913045483084949