Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2251 123 2e-23 seq210 109 4e-19 seq10174 102 5e-17 seq30086 91.5 1e-13 >seq2251 Length=6394 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || || | ||| |||| |||| ||||| ||||| ||| Sbjct 1194 TCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAG 1135 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || ||||||||||||||| | || | ||||||||||| | ||||| ||||||| Sbjct 1134 ATAAGTCGTTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTC 1075 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || || || | | ||| || |||| || ||||| || || || ||||| || ||| Sbjct 1074 TCAATAGAGTCGCTAGGCTCAACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACA 1015 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 1014 AAAATTTGCAT 1004 >seq210 Length=64943 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| || || |||| |||| ||||| ||||| || || || Sbjct 30407 CTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAA 30466 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || |||||||| | || | ||||||||||| | || || || || Sbjct 30467 TATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATT 30526 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||| ||| | | ||| || || | ||| || ||||| ||||| || ||||| || Sbjct 30527 CTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCAC 30586 Query 34966 AAAGATCTGCATG 34978 ||| || |||||| Sbjct 30587 AAATATTTGCATG 30599 Score = 107 bits (118), Expect = 1e-18 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| |||| ||| ||||| || || || ||||| || || |||| |||| Sbjct 30843 AGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCT 30902 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| ||||||||||| | || ||||| || |||| | ||||||||||| Sbjct 30903 TCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCT 30962 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || || ||| ||| ||| || || | || || | Sbjct 30963 TGAATCTTAGCCTTTAC--ATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAG 31020 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||| ||||| || ||||| |||||||| |||||||| Sbjct 31021 TCTTCCCCGTTAGCGTCTTCACAAAGATTTGCATGAT 31057 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| | ||| |||| |||| ||| |||||| |||||||| |||||||| Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| | || |||| || || || || ||||| || ||||| ||||| | || Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || || ||||||| ||| | | ||| || Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| || ||||| || || || || || || ||||| ||||| Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || || || ||||| || || |||| |||| |||| ||||| || || || Sbjct 39673 CTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTACCCGCAAA 39614 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || |||||||| | || | ||||||||||| | ||||| || || Sbjct 39613 TATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATTTTCGCCTTCACATT 39554 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||| ||| | | ||| || || | ||| || ||||| || || || ||||| || Sbjct 39553 CTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCAC 39494 Query 34966 AAAGATCTGCATG 34978 ||| || |||||| Sbjct 39493 AAATATTTGCATG 39481 Score = 96.9 bits (106), Expect = 2e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 34796 ATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGT 34855 || || ||||| || | | |||| |||| |||| ||||| ||||||||||| | || Sbjct 40347 ATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGC 40288 Query 34856 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT 34915 |||||||| | || | ||||||||||| | || || || || ||||||| Sbjct 40287 TGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAG 40228 Query 34916 TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975 ||| | | ||| || || | ||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 40227 TCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGC 40168 Query 34976 ATG 34978 ||| Sbjct 40167 ATG 40165 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| |||| ||| ||||| || || || ||||| || || |||| |||| Sbjct 39921 AGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCT 39862 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| ||||||||||| | || ||||| || |||| | ||||||||||| Sbjct 39861 TCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCT 39802 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || || ||| ||| ||| || || | || || | Sbjct 39801 TGAATCTTCGCCTTCAC--ATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTG 39744 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| ||||| || |||||| Sbjct 39743 TCTTGCCAGTTAGCGTCTTCACAAATATTTGCATG 39709 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || || || ||||| || | | |||| |||| |||| ||||| |||||||| Sbjct 30635 CTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAA 30694 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| | || || ||||| | || | ||||||||||| | || || || || Sbjct 30695 GATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATT 30754 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||| ||| | | ||| || || | ||| || ||||| || || | ||||| || Sbjct 30755 CTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCAC 30814 Query 34966 AAAGATCTGCATG 34978 ||| || |||||| Sbjct 30815 AAATATTTGCATG 30827 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || || || ||||| || | | |||| |||| |||| ||||| |||||||| Sbjct 40129 CTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAA 40070 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| | || || ||||| | || | ||||||||||| | || || || || Sbjct 40069 GATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATT 40010 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||| ||| | | ||| || || | ||| || ||||| || || | ||||| || Sbjct 40009 CTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCAC 39950 Query 34966 AAAGATCTGCATG 34978 ||| || |||||| Sbjct 39949 AAATATTTGCATG 39937 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || |||||||| ||||| || || | || |||| |||| |||||||| || || Sbjct 39445 CTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTCCAACTGCTTTCCTGCAAA 39386 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || || ||||| | || | ||||||||||| | || || || || | Sbjct 39385 GATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCAC--A 39328 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || ||||| ||| | | ||| || || | || || ||||| ||||| | || || Sbjct 39327 TTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTCTTGCCCGTCAACGTTTTC 39268 Query 34964 ACAAAGATCTGCAT 34977 |||||||| ||||| Sbjct 39267 ACAAAGATTTGCAT 39254 >seq10174 Length=1708 Score = 102 bits (112), Expect = 5e-17 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || ||||| || | | ||| |||| || | |||||| || || || Sbjct 1076 CTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAA 1135 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || |||||||| | || | ||||||||||| | |||||| || || | Sbjct 1136 AATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGAATTTTTGCCTTCAC--A 1193 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || || ||| | || || |||| ||| |||||||| || ||||| || || Sbjct 1194 TTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTG 1253 Query 34964 ACAAAGATCTGCAT 34977 ||||| |||||||| Sbjct 1254 ACAAAAATCTGCAT 1267 >seq30086 Length=500 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || || || ||||| || | | |||| |||| |||| ||||| |||||||| Sbjct 165 CTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAA 224 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| | || || ||||| | || | ||||||||||| | || || || || Sbjct 225 GATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATT 284 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||| ||| | | ||| || || | ||| || ||||| || || | ||||| || Sbjct 285 CTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCAC 344 Query 34966 AAAGATCTGCATG 34978 ||| || |||||| Sbjct 345 AAATATTTGCATG 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325573357356329