Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq210 104 2e-17 seq2251 100 2e-16 >seq210 Length=64943 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||||||| | || ||||| || |||||| | || |||| | | Sbjct 42172 ATGCAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGAGCCGAGT 42231 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||| | | | | || || |||||| || || || ||| | || ||| || Sbjct 42232 GATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAA 42291 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | || || | ||| ||||||||| ||||||||| || || ||||||||||| Sbjct 42292 CAACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAAC 42351 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||||| || | || ||||| || | |||||||| || Sbjct 42352 ATTCAAAAGGAGTCAACCCTTCATTTGGTGCTGCGTTTGCGAGGTGG 42398 >seq2251 Length=6394 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 |||||||||||||||||| ||||| | || || |||||||| || | || ||| | Sbjct 1000 TAAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCC 1059 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 | |||| || | | | || ||| || ||| || || || ||| | || || Sbjct 1060 TAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 ||||| ||||||| | ||| || || ||| ||||||| | ||| | | ||||| Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||||||||||||| || ||| | || | || |||||| | ||||| |||| Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGGAA 1232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398730518290699