Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2251 127 2e-24 seq210 116 3e-21 seq30086 82.4 6e-11 >seq2251 Length=6394 Score = 127 bits (140), Expect = 2e-24 Identities = 155/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| ||||| ||||| ||||||||||| || || | | || || ||| || | || Sbjct 1207 ATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGCCCATCCTCCAACTG 1148 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||| ||| | || | || |||||| || || || || ||||| |||||||| ||||| Sbjct 1147 CTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTG-AATTT 1089 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | |||||| | || | || ||| | | || || |||||||| || ||||| |||| Sbjct 1088 TCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACCTCAAGAGTGATGGTTTTCCCAG 1029 Query 29762 TTAAGGTTTTAACAAATATCTGCATTTTA 29790 | | |||||||||||| || ||||||||| Sbjct 1028 TAAGGGTTTTAACAAAAATTTGCATTTTA 1000 >seq210 Length=64943 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||||||||||||||||||||| || || || ||||||||||| || |||| Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || | ||||| |||||| | || | | ||| || ||||| ||| Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| || | || ||| | |||| | ||| | || || Sbjct 42278 ATGCCCTCCTTGTCCTG-AATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCAC 42220 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || |||||||| | ||||| || || || ||||| Sbjct 42219 CTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||||||||| || || || ||||| || || || || | | |||||| | Sbjct 39696 CGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA 39637 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || ||| ||||||| | ||||| ||||| ||||| ||||| ||| Sbjct 39636 TCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTG 39577 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || ||| | |||| | |||| | || || || | || || Sbjct 39576 TCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 39517 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || |||||||| ||||| Sbjct 39516 GTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||| || || || || ||||||||||| || || | | |||||| Sbjct 30383 ACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACC 30442 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| ||||||| | ||||| ||||| ||||| ||||| || Sbjct 30443 ATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTT 30502 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | || ||| | |||| | |||| | || || || | || | Sbjct 30503 GTCTTG-AATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAA 30561 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || || | || || |||||||| ||||| Sbjct 30562 TAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||||||||| || ||||| ||||| || || || || | | |||||| | Sbjct 30840 CGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA 30899 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || || | || || | |||||||||||||| || ||||| ||| Sbjct 30900 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTG 30959 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | || ||| | || | | ||| | || ||||| ||||| || Sbjct 30960 TCTTG-AATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAAT 31018 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || |||| || || ||||| || ||||| Sbjct 31019 AGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||||||||| || ||||| ||||| || || || || | | |||||| | Sbjct 39924 CGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA 39865 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || || | || || | |||||||||||||| || ||||| ||| Sbjct 39864 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTG 39805 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | || ||| | || | | ||| | || || || || || || Sbjct 39804 TCTTG-AATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAAT 39746 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||||| || || |||||||| ||||| Sbjct 39745 TGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||||||| | || || |||||||||||||| || || | | || ||| | Sbjct 39468 CGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCA 39409 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || ||| | ||||| | || || ||||| ||||| ||||| ||| Sbjct 39408 TCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTG 39349 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || || ||| | || | | |||| | || || || | || ||| Sbjct 39348 TCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATA 39289 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAAC 29794 || ||||| || || ||||| ||||| || ||||| | |||| Sbjct 39288 GTCTTGCCCGTCAACGTTTTCACAAAGATTTGCATCCTGAAAC 39246 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||||||| | || || || ||||| || || || || | | |||||| | Sbjct 30612 CGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA 30671 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || || | || || | || || ||||| ||||| ||||| ||| Sbjct 30672 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTG 30731 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || || ||| | |||| | |||| | || || || | || || Sbjct 30732 TCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 30791 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || || |||||||| ||||| Sbjct 30792 GTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||||||| | || || || ||||| || || || || | | |||||| | Sbjct 40152 CGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA 40093 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || || | || || | || || ||||| ||||| ||||| ||| Sbjct 40092 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTG 40033 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || || ||| | |||| | |||| | || || || | || || Sbjct 40032 TCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 39973 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || || |||||||| ||||| Sbjct 39972 GTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 >seq30086 Length=500 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||||||| | || || || ||||| || || || || | | |||||| | Sbjct 142 CGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA 201 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || || | || || | || || ||||| ||||| ||||| ||| Sbjct 202 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTG 261 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || || ||| | |||| | |||| | || || || | || || Sbjct 262 TCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 321 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || || |||||||| ||||| Sbjct 322 GTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||||||||| || ||||| ||||| || || || || | | |||||| | Sbjct 370 CGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA 429 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || || || | || || | |||||||||||||| || ||||| ||| Sbjct 430 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTG 489 Query 29692 TCTTG 29696 ||||| Sbjct 490 TCTTG 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385077926997831