Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq75 233 1e-55 seq966 178 1e-38 seq89 104 2e-16 seq8839 100 2e-15 >seq75 Length=122079 Score = 233 bits (258), Expect = 1e-55 Identities = 942/1463 (64%), Gaps = 27/1463 (2%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 || |||||||| ||||| || || | ||| || || |||||||| ||||| || || | Sbjct 117558 ACGTTAAGAATGCCATTAGCGTCAATATCGAAGGTCACTTCAATCTGAGGAACACCGCGA 117617 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 |||| || || || || ||| | || | ||||| || || ||| || | Sbjct 117618 GGAGCTGGAGGAATACCAGACAACTCGAACTTGCCCAGCAAGTTGTTGTCTCGTGTCATC 117677 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 || ||||||||| | | ||||| || | | |||||||| || || || || Sbjct 117678 GCACGCTCACCCTCGTACACCTGGATCAATACACCCGGCTGATTATCCGAGTAGGTGGTG 117737 Query 281612 AATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 || |||| | | || | ||||| || || || | | ||| | ||||| | Sbjct 117738 AAGG-TCTGCGTCTGTTTCGTTGGAATCGTCGTATTACGTTTAATCAGTGCAGTCATTAC 117796 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 |||||| || || || | ||| || || ||||| | ||||| | || | | || || Sbjct 117797 ACCACCTGCCGTCTCCAGACCCAGTGACAGAGGCGCCACATCCAGCAGCAACAGATCCTG 117856 Query 281731 AAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 | || | | || | ||| | ||| ||||| || | ||| |||||||| |||| Sbjct 117857 CACCGCCTC-TGATTTGTCGCCACTCAAAATGGCTGCCTGCACAGCCGCACCATAGGCAA 117915 Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGA 281848 |||| || || || || | || | || | | |||||||||||| | ||| | | Sbjct 117916 CAGCCTCGTCTGGGTTTATAGACTTGTTCAACTCGCGACCATTGAAAAAGTCTTGTAGCA 117975 Query 281849 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908 | || | | ||||| |||||||| | ||| ||||| ||||| || || ||||| || Sbjct 117976 ACTTCTGT-ACCTTTGGAATACGTGTTGAACCTCCCACTAACACTATATCATGAACGGCA 118034 Query 281909 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT-CTAAA 281967 | ||||||| |||| ||| ||| | || || || || || || | ||| | || Sbjct 118035 GCCTTATCCAACTTTGCATCACGTAACGCCTTCTCCACTGGATCCAG-CGTGCTGCGGAA 118093 Query 281968 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATT 282025 | ||||| || || || || || || | || || ||| | || || |||||| Sbjct 118094 GAGGTCTGCGCACAGCTCCTCAAAACGCGCCCGCGT--GATCGACGTGTAGAAGTCAATT 118151 Query 282026 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG---TCGAAGAAGATAGTGCACGT 282082 ||||| | ||| || || | ||||| | | |||| |||| || || | | | Sbjct 118152 CCTTCCATCAACGAGTCGATCTCAATATTCGCCTGAGCACTCGAGCTCAAT-GTTCTCTT 118210 Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC--TTTTGCT-GATTGATTCAAA 282139 | || | ||||| ||||| | || | || | ||| | ||| | || | ||||| Sbjct 118211 T--GCTCTCTCACAGGCTGTACGCAGACGACGAATGGCCCTCTTGTTCGA---AGTCAAA 118265 Query 282140 TCTGT---TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196 || | ||| | || | ||| || || || ||| | | || |||||| || Sbjct 118266 TCCTTCCCTTTGTGCTTCCGCTTAAACTCCTCCACAAAGTGACTGACCAGACGAGAGTCG 118325 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 || || ||||| || | | || | || | || | | || | || | ||||| Sbjct 118326 AAGTCCTCACCGCCAAGATGCGTGTCACCGGCAGTTGACTTCACCTCAAATATGCCATCC 118385 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| |||| | || ||||| |||||| || |||| ||||||||| || || || Sbjct 118386 TCAATTGACAGGATAGACACATCGAAGGTTCCGCCGCCCAAATCAAAAATGAGCACGTTG 118445 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 || ||| || || || || | ||| || || | ||||| || || |||||||| Sbjct 118446 CGCTCCTTGCCTACCTTCTTGTCTAAACCGTAGGCGATGGCAGCTGCTGTCGGTTCATTG 118505 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 ||||| | || || || | || | || |||| ||||| || || || || | || Sbjct 118506 ATAATACGCAGCACGTTCATTCCTGATATCGTTCCAGCATCCTTCGTTGCCTGACGCTGA 118565 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 ||||| || || || || || ||||| || ||||| || || | || || | ||| Sbjct 118566 CTGTCGTTGAAGTAAGCCGGTACCGTAATTACCGCATCAGTCACCTGCTTACCCAGATAC 118625 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556 || ||| || | ||||| || | | | ||| ||||| |||| ||| | | | Sbjct 118626 GCCTCTGCGGTCTCCTTCATCTTCATCAGCACCATAGATGATATTTCTTCCGCACTGAAC 118685 Query 282557 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 282616 ||||| | ||| | || ||||||| | || || || ||| || ||| Sbjct 118686 TGCTTCGTCTCACCACGGTACTCCACTTCAATCTTCGGCTTGCCGCCCGAATTGATCACT 118745 Query 282617 TTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 282676 || || ||||||| ||||||||| ||| ||| | ||||| || | ||||| Sbjct 118746 TTGAAAGGCCAATGTTTCATATCGCCTTGCACAGCCTTGTCATCGAAGCGACGTCCAATC 118805 Query 282677 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCA 282736 || || ||||||||||| | ||| ||| | ||||| | ||| | || | ||||| ||| Sbjct 118806 AAGCGCTTTGCATCAAATACAGTGTTGCTGGGATTCATGGCAACCTGGTTCTTGGCAGCA 118865 Query 282737 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 282796 || ||||| ||| | || || || ||||| | |||||| || || || ||||| || Sbjct 118866 TCGCCAATGAGACGCTCCGTATCCGTAAAAGCAACATAACTCGGTGTAGTACGATTGCCC 118925 Query 282797 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTT 282856 || || || || |||||||| || || || | || | || || || || ||| || Sbjct 118926 TGGTCGTTAGCGATAATTTCCACCTTGCCGTGCTGAAACACGCCAACGCAGGAAAACGTC 118985 Query 282857 GTTCCTAAATCAATACCAATAGC 282879 || |||||||||||||||| ||| Sbjct 118986 GTCCCTAAATCAATACCAACAGC 119008 >seq966 Length=15216 Score = 178 bits (196), Expect = 1e-38 Identities = 395/586 (67%), Gaps = 10/586 (2%) Strand=Plus/Minus Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 |||||| | ||||||| ||||||||| || | ||||| | ||| | |||| |||| | Sbjct 1672 CAAAAGGGAAACATCAAAGGTTCCACCGCCAAGGTCAAACACAAGAATATTCTTTTCCGT 1613 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 |||| |||| || | || || |||| || || || || || |||||||| |||| Sbjct 1612 ATCTT---TTTTGTCCAATCCGTAAGCAATCGCTGCGGCGGTAGGCTCATTAATGATTCG 1556 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 ||| ||| | | ||||| || || || ||||| || ||||| | ||| | || || Sbjct 1555 CAAGACAGTCAAGCCAGCTATAGCACCAGCGTCTTTGGTTGCTTGACGTTGGGCGTCATT 1496 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGC 282504 |||||| ||||| ||||| | ||| || | ||| ||||| |||||| ||| || || Sbjct 1495 AAAATAAGCAGGCACAGTGACAACAGCGTGTGTGACTTCAGTTCCAAGATAGGCTTCAGC 1436 Query 282505 TGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGA 282564 | | ||||||||||| | || ||| | |||| | || |||| | ||| Sbjct 1435 AATCTCCTTCATTTTACTGAGAACCATAGCCGAAACCTCCTCAGGAGCGAACCCCTTCTC 1376 Query 282565 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 282624 || || | || | | || ||||| | || || |||||||| || Sbjct 1375 CTCGTTACCTACTTGCACCTGCATGTACGGTTTGCTGTTTTTGTTGATCACTTTAAAGGG 1316 Query 282625 CCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTT 282684 || ||| ||||| || ||| || ||| | | |||| | ||| || | ||||| Sbjct 1315 GTAACGTTTAATATCACTCTGCACATCTTTGTCGTCATAATCACGACCGATGAGACGTTT 1256 Query 282685 TGCATCAAAAATAGTATTGGTTGGATT--AACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 |||||||| | |||||| | ||||| || | |||| |||| |||||| || || ||| Sbjct 1255 GGCATCAAACAAAGTATTCTTGGGATTCGAAGT-CAGC-TGATTTTTGGCAGCGTCACCA 1198 Query 282743 ATCAGATGTT--CTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 282799 || || ||| | ||| | | ||||| |||||| ||||||||| | ||||| ||||| Sbjct 1197 ATTAGCCGTTCCCCGTCACCAGAAAATGCAACATAAGATGGAGTTATTCGATTGCCTTGG 1138 Query 282800 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 282845 || || || || |||||||| ||||| | | ||||| |||| Sbjct 1137 TCGTTTGCGATGATTTCAACACGTCCATTCTTGAAAACACCAACAC 1092 >seq89 Length=114867 Score = 104 bits (114), Expect = 2e-16 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 432277 AAAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATA 432336 || || ||| ||| || | || || || |||| || |||||||| |||||||| ||| Sbjct 40831 AACGACTGAAAGGGAAGGCCGGGCGCATACGAGGCAACTTGATGGGGAAGCGTGTTGATT 40890 Query 432337 TGTCTGCACGTACAGTTATTACTTCTGATCCTAATAT-TGCTCTCAATGAAGTTGGTGTT 432395 | |||||||| || ||||| ||| |||| |||||| | ||| ||| || ||||||||||| Sbjct 40891 TTTCTGCACGAACTGTTATAACTGCTGACCCTAATTTGTGC-CTCGATCAAGTTGGTGTT 40949 Query 432396 CCTCTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAT 432455 |||| | |||||| | || || |||| | ||| || ||| || ||| || ||| Sbjct 40950 CCTCGAACGATTGCGCAGAACCTAACTTATCCGGAACGAGTTACACAATCTAACATAGAT 41009 Query 432456 T 432456 | Sbjct 41010 T 41010 >seq8839 Length=1967 Score = 100 bits (110), Expect = 2e-15 Identities = 439/691 (64%), Gaps = 8/691 (1%) Strand=Plus/Plus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 |||||| || || || ||||| | || | |||| ||| | | || | || | || Sbjct 1266 ATCAAAGTCCTCTCCACCCAAATGCGTGTCACCTGCCGTCGACTTCACCTCAAATATCCC 1325 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 ||| || | |||| || | |||||| || || ||||||| ||| || || || || Sbjct 1326 ATCCTCTATGGACAGAATGGACACATCAAATGTCCCCCCACCCAAATCGAAGATGAGCAC 1385 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || || | || || || || | |||||||| | || || || || || || Sbjct 1386 GTTGCGCTCCCTCTCCACCTTCTTGTCCAATCCATACGCTATCGCCGCCGCCGTCGGCTC 1445 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| || || | || ||||| | ||| | || | || ||||| || || || || | Sbjct 1446 ATTGATGATGCGCAGCACATTCAAACCCGATATCGTACCCGCATCCTTCGTCGCCTGACG 1505 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTCCAA 282491 || ||||| || || ||||| || || || || ||||| || || ||| | |||| Sbjct 1506 CTGACTGTCGTTGAAGTACGCAGGCACTGTGATCACTGCATCCGTCACCTTCCTCCCCAA 1565 Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 ||| || || || | ||||| || | | ||| || || || | || | | Sbjct 1566 -ATACGCCTCCGCCGTCTCCTTCATCTTCAACAGCACCATCGACGATATCTCCTCCGCAC 1624 Query 282552 AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 282611 | ||||| ||| |||| || || | | || || || |||| | Sbjct 1625 TGAACTGCTTCCTCTCACCACGATACTCCACCTCTATCTTCGGCTTCCCTCCCGCATTTA 1684 Query 282612 TAACTTTAAATGGCCAATATTTCATATCTGATTGAACA---CTTTGGTCATTAAAATCTC 282668 | || || || ||||| | ||||| || || || || | |||| ||| | Sbjct 1685 TCACCTTGAACGGCCAGTGCTTCATGTCCTCCTGCACTGCCCTATCGTCA---AAACGAC 1741 Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATT 282728 ||||| | || || |||||||| | || ||||| || || | || | |||| | Sbjct 1742 GTCCAATCAGACGCTTCGCATCAAACACTGTGTTGGTGGGGTTCATGGCTACCTGATTCT 1801 Query 282729 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 282788 | || ||||| || |||||| | || || || || || | ||||| || || |||| Sbjct 1802 TCGCGGCATCGCCGATCAGACGCTCCGTATCCGTGAAGGCCACATAACTCGGCGTCGTGC 1861 Query 282789 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 282848 | || ||||||||||| || || || || || || || | ||| | ||||| ||||| Sbjct 1862 GGTTGCCTTGATCATTGGCGATTATCTCCACCTTGCCGTGTTGGAACACACCCACACATG 1921 Query 282849 TAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || || ||||| ||||||||||| | ||| Sbjct 1922 AGAACGTCGTTCCCAAATCAATACCCACAGC 1952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739153059064566