Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq210 145 1e-29 seq30086 140 6e-28 >seq210 Length=64943 Score = 145 bits (160), Expect = 1e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || || || || ||||| || |||||||| || || || ||| | | ||| Sbjct 30840 CGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA 30899 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | || || || || ||||||| | || ||||| || || || || ||||| Sbjct 30900 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTG 30959 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| || |||||||| ||||| | |||| | || || ||||||| ||| || Sbjct 30960 TCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATA 31019 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 ||||| || || | |||||| ||||| || ||||| || Sbjct 31020 GTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCATGAT 31057 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| ||||||||| || || || || || || || || || || || || || || Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | |||||| || | ||||| ||||||||||| || | |||||| || || || Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || |||||||| || || ||||| || |||| |||| | || || || Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || ||||||||||| || | || || || || || ||||| Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 140 bits (154), Expect = 6e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || |||| ||| || || || |||||||| || ||||| | | | || Sbjct 30612 CGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA 30671 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | || || || || ||||||| | ||||| || || || || || ||||| Sbjct 30672 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTG 30731 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| ||||| || || ||||| || |||| ||| | || || || ||||| || ||| Sbjct 30732 TCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 30791 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||||||||| |||||||| ||||| Sbjct 30792 GTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 140 bits (154), Expect = 6e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || || || || ||||| || |||||||| || || || ||| | | ||| Sbjct 39924 CGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA 39865 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | || || || || ||||||| | || ||||| || || || || ||||| Sbjct 39864 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTG 39805 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| || || ||||| ||||| | |||| | || || || |||| || || Sbjct 39804 TCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATT 39745 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | |||||| |||||||| ||||| Sbjct 39744 GTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 140 bits (154), Expect = 6e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || |||| ||| || || || |||||||| || ||||| | | | || Sbjct 40152 CGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA 40093 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | || || || || ||||||| | ||||| || || || || || ||||| Sbjct 40092 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTG 40033 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| ||||| || || ||||| || |||| ||| | || || || ||||| || ||| Sbjct 40032 TCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 39973 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||||||||| |||||||| ||||| Sbjct 39972 GTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || || ||||| || || || |||||||| || || || ||| | | ||| Sbjct 39696 CGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA 39637 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | || || || ||||| || | | || || || || || || || ||||| Sbjct 39636 TCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTG 39577 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| || || || || ||||| || |||| ||| | || || || ||||| || ||| Sbjct 39576 TCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 39517 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| |||| |||||| |||||||| ||||| Sbjct 39516 GTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||||| || || || || || || || ||||| ||| | | ||| Sbjct 30383 ACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACC 30442 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || || || || ||||| || | | || || || || || || || ||||| Sbjct 30443 ATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTT 30502 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||||||||| || || ||||| || |||| ||| | || || || ||||| || || Sbjct 30503 GTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAAT 30562 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | |||||| |||||||| ||||| Sbjct 30563 AGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 104 bits (114), Expect = 5e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 82629 ATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTT 82688 ||||| || ||||| | | | || ||||| | || || || || ||||||| | Sbjct 40347 ATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGC 40288 Query 82689 TGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTA 82748 || || || || || || || ||||| ||||||||||| || || ||||| || |||| Sbjct 40287 TGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAG 40228 Query 82749 TCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGC 82808 ||| | || || || ||||| || || ||||| || || | |||||| |||||||| ||| Sbjct 40227 TCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGC 40168 Query 82809 AT 82810 || Sbjct 40167 AT 40166 >seq30086 Length=500 Score = 140 bits (154), Expect = 6e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || |||| ||| || || || |||||||| || ||||| | | | || Sbjct 142 CGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA 201 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | || || || || ||||||| | ||||| || || || || || ||||| Sbjct 202 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTG 261 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| ||||| || || ||||| || |||| ||| | || || || ||||| || ||| Sbjct 262 TCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATC 321 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||||||||| |||||||| ||||| Sbjct 322 GTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Score = 89.7 bits (98), Expect = 1e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 82689 TGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTA 82748 || || || || || || || ||||| ||||||||||| || || ||||| || |||| Sbjct 7 TGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAG 66 Query 82749 TCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGC 82808 ||| | || || || ||||| || || ||||| || || | |||||| |||||||| ||| Sbjct 67 TCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGC 126 Query 82809 AT 82810 || Sbjct 127 AT 128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981448665420849