Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq10174 116 4e-21 seq210 102 8e-17 seq4589 100 3e-16 seq30086 89.7 5e-13 >seq10174 Length=1708 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| |||||||| ||| || | | || || | |||||||| Sbjct 1071 GTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTCTAATTGCTTGCCA 1130 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CTT 133582 || |||| || ||||||||||| |||||||| || |||||||| ||| ||||| ||| Sbjct 1131 GCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTC-TTGAATTTTTGCCTT 1189 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| | ||| | || || || || | ||||| ||| |||||||| ||||| Sbjct 1190 CACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGT 1249 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || ||||||||||| Sbjct 1250 TTTGACAAAAATCTGCAT 1267 >seq210 Length=64943 Score = 102 bits (112), Expect = 8e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| || ||||||||||| ||| || ||| ||| | || || | Sbjct 39687 AAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA-TCTTCCAA 39629 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| ||||| | || | ||||||||||| || || ||||| |||||||| ||| Sbjct 39628 CTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGAT 39569 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||| | || ||| | |||||||| || | ||| | || ||||| Sbjct 39568 TTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCC 39509 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| || || || || || |||||| Sbjct 39508 AGTCAGCGTCTTCACAAATATTTGCATG 39481 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || || || ||||||||||| ||| || ||| ||| | || || | Sbjct 39915 AAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA-TCTTCCAA 39857 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || | |||||||| || || |||||||| |||||||| || Sbjct 39856 CTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGAAT 39797 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | ||||| | || |||||||||| || | || | || ||||| Sbjct 39796 CTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCTTGCC 39737 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || || || || |||||| Sbjct 39736 AGTTAGCGTCTTCACAAATATTTGCATG 39709 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| || ||||||||||| || || ||| | | | || || | Sbjct 30621 AAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA-TCTTCCAA 30679 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || | ||||| ||||| || || ||||| |||||||| ||| Sbjct 30680 CTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGAT 30739 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | ||| | || ||| | |||||||| || | ||| | || ||||| Sbjct 30740 CTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCC 30799 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || || |||||| Sbjct 30800 AGTCAACGTCTTCACAAATATTTGCATG 30827 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| || ||||||||||| || || ||| | | | || || | Sbjct 40143 AAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA-TCTTCCAA 40085 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || | ||||| ||||| || || ||||| |||||||| ||| Sbjct 40084 CTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGAT 40025 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | ||| | || ||| | |||||||| || | ||| | || ||||| Sbjct 40024 CTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCC 39965 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || || |||||| Sbjct 39964 AGTCAACGTCTTCACAAATATTTGCATG 39937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || || || ||||||||||| ||| || ||| ||| | || || | Sbjct 30849 AAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCA-TCTTCCAA 30907 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || | |||||||| || || |||||||| |||||||| || Sbjct 30908 CTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGAAT 30967 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | ||||| | || ||||||| || || | || | || || || Sbjct 30968 CTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCTTCCC 31027 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || || || || |||||| Sbjct 31028 CGTTAGCGTCTTCACAAAGATTTGCATG 31055 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || ||||| || || ||| ||| | || || |||||||| || Sbjct 30402 GTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCA-TCTTCCAGCTGCTTACC 30460 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || ||||| |||||||| ||||| ||| Sbjct 30461 CGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTT 30520 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | || ||| | |||||||| || | ||| | || || || || || || Sbjct 30521 CACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGT 30580 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || || |||||| Sbjct 30581 CTTCACAAATATTTGCATG 30599 >seq4589 Length=3505 Score = 100 bits (110), Expect = 3e-16 Identities = 160/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || ||||||||||| ||||| ||||| || ||||| ||||||||||| || || || Sbjct 2379 AGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTA 2438 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 || || ||||||| || | |||||| | || || | ||||| || || ||| Sbjct 2439 AGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAG 2498 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || || ||||| | || || || |||| ||||| || ||| ||| |||| | Sbjct 2499 AAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTC 2558 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTT-TTTGCGCACGCACGGCA 120865 |||||||||| | ||||| || ||||| || ||| ||||| |||| Sbjct 2559 GCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCG-ACGCATGGCA 2604 >seq30086 Length=500 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| || ||||||||||| || || ||| | | | || || | Sbjct 151 AAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCA-TCTTCCAA 209 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || | ||||| ||||| || || ||||| |||||||| ||| Sbjct 210 CTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTGGAT 269 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | ||| | || ||| | |||||||| || | ||| | || ||||| Sbjct 270 CTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTGCC 329 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || || |||||| Sbjct 330 AGTCAACGTCTTCACAAATATTTGCATG 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483238967308840