Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 8e-15 >seq89 Length=114867 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 304885 TTTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATC 304944 ||| ||||| ||| | ||||| || || || ||||| ||| ||||| || | | || Sbjct 40736 TTTGCAATACCATGTGGCAACCTTGATTGACAATGATATTCCTGGACTTCCGAAAGCTAT 40795 Query 304945 TCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCG 305004 ||| | ||||| |||||||| ||| || | |||||| | ||||| || | || || Sbjct 40796 TCAGAAGTCTGGAAGACCTTTGAAGTCAATCAAGCAACGACTGAAAGGGAAGGCCGGGCG 40855 Query 305005 TATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACC 305064 || ||||| || | ||||| || |||||||||||| |||| ||| ||| || || | Sbjct 40856 CATACGAGGCAACTTGATGGGGAAGCGTGTTGATTTTTCTGCACGAACTGTTATAACTGC 40915 Query 305065 TGA 305067 ||| Sbjct 40916 TGA 40918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186355235080451