Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq210 113 3e-20 seq30086 86.0 4e-12 >seq210 Length=64943 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| ||||| ||| |||||||| ||||| ||||| || ||||| | || || Sbjct 39691 CACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 39632 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||| || || || ||||| |||||||||||||| || | || | || || ||||| Sbjct 39631 CAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTG 39572 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 |||||| ||| |||| || | | ||| |||| ||||| || | || ||||| | Sbjct 39571 GATTTTCGCCTTC-ACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCT 39513 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||| || ||||| || ||||| Sbjct 39512 TGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| | ||| ||||||||| |||||||| || || || || || | || || Sbjct 39463 CACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTC 39404 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||| || ||||| ||||| ||||||||||| || || | || | || || ||||| Sbjct 39403 CAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 39344 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || ||| ||| |||| || | | ||| |||| ||||| || | || || || | Sbjct 39343 GATCTTCGCCTTC-ACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTCT 39285 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || |||||||| |||||||| ||||| Sbjct 39284 TGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| || || || |||||||| ||||| ||||| || ||||| | || || Sbjct 39919 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 39860 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||| || || ||||| || || |||||||||||||| |||| | || || ||||| Sbjct 39859 CAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTG 39800 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| ||| ||| |||| || | || || || | ||||| || | || || || | Sbjct 39799 AATCTTCGCCTTC-ACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCT 39741 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||| || ||||| || ||||| Sbjct 39740 TGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| || || || |||||||| ||||| ||||| || ||||| | || || Sbjct 30845 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 30904 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||| || || ||||| || || |||||||||||||| |||| | || || ||||| Sbjct 30905 CAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTG 30964 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| || | | |||| || | || || || | || || || | || || || | Sbjct 30965 AATCTT-AGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCT 31023 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||| || |||||||| ||||| Sbjct 31024 TCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 87.8 bits (96), Expect = 1e-12 Identities = 168/244 (69%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 33507 ACAAATAAAATCGTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTG 33566 || || |||||| ||| || | | ||| | ||| | ||| ||||| ||| ||||| Sbjct 30358 ACGAAAAAAATCA--ACCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTG 30415 Query 33567 TATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACG 33626 |||||||| || || || ||||| | || |||| || || || ||||| |||||||| Sbjct 30416 AATGTTGTAGTCAGACAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACG 30475 Query 33627 CTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGG 33685 |||||| || | || | || || ||||| ||| ||| ||| |||| || | | Sbjct 30476 CTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTC-ACATTCTCTATCG 30534 Query 33686 TGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCT 33745 ||| || | ||||| || | || || || || || || | ||| || ||||| || | Sbjct 30535 AGTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTT 30594 Query 33746 GCAT 33749 |||| Sbjct 30595 GCAT 30598 >seq30086 Length=500 Score = 86.0 bits (94), Expect = 4e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| || || || |||||||| ||||| ||||| || ||||| | || || Sbjct 375 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 434 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 ||| || || ||||| || || |||||||||||||| |||| | || || ||||| Sbjct 435 CAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTC 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328583453046720